Protein–RNA interactions for Protein: Q0VAM2

RASGEF1B, Ras-GEF domain-containing family member 1B, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RASGEF1BQ0VAM2 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RASGEF1BQ0VAM2 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
RASGEF1BQ0VAM2 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RASGEF1BQ0VAM2 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RASGEF1BQ0VAM2 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RASGEF1BQ0VAM2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RASGEF1BQ0VAM2 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.7■□□□□ 0.74
RASGEF1BQ0VAM2 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RASGEF1BQ0VAM2 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.7■□□□□ 0.74
RASGEF1BQ0VAM2 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RASGEF1BQ0VAM2 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
RASGEF1BQ0VAM2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RASGEF1BQ0VAM2 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RASGEF1BQ0VAM2 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RASGEF1BQ0VAM2 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.7■□□□□ 0.74
RASGEF1BQ0VAM2 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.7■□□□□ 0.74
RASGEF1BQ0VAM2 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RASGEF1BQ0VAM2 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.7■□□□□ 0.74
RASGEF1BQ0VAM2 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RASGEF1BQ0VAM2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
RASGEF1BQ0VAM2 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
RASGEF1BQ0VAM2 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
RASGEF1BQ0VAM2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.69■□□□□ 0.74
RASGEF1BQ0VAM2 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC19.69■□□□□ 0.74
RASGEF1BQ0VAM2 AC142381.2-201ENST00000566120 298 ntBASIC19.69■□□□□ 0.74
RASGEF1BQ0VAM2 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RASGEF1BQ0VAM2 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RASGEF1BQ0VAM2 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
RASGEF1BQ0VAM2 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.69■□□□□ 0.74
RASGEF1BQ0VAM2 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
RASGEF1BQ0VAM2 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.69■□□□□ 0.74
RASGEF1BQ0VAM2 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
RASGEF1BQ0VAM2 COMT-203ENST00000403184 2217 ntTSL 2 BASIC19.68■□□□□ 0.74
RASGEF1BQ0VAM2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RASGEF1BQ0VAM2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.68■□□□□ 0.74
RASGEF1BQ0VAM2 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RASGEF1BQ0VAM2 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RASGEF1BQ0VAM2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
RASGEF1BQ0VAM2 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RASGEF1BQ0VAM2 AC242852.2-201ENST00000615738 1807 ntBASIC19.68■□□□□ 0.74
RASGEF1BQ0VAM2 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RASGEF1BQ0VAM2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.68■□□□□ 0.74
RASGEF1BQ0VAM2 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.68■□□□□ 0.74
RASGEF1BQ0VAM2 AC008764.7-201ENST00000593779 1081 ntBASIC19.68■□□□□ 0.74
RASGEF1BQ0VAM2 AL031432.3-201ENST00000607698 485 ntBASIC19.68■□□□□ 0.74
RASGEF1BQ0VAM2 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
RASGEF1BQ0VAM2 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
RASGEF1BQ0VAM2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
RASGEF1BQ0VAM2 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
RASGEF1BQ0VAM2 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
RASGEF1BQ0VAM2 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
RASGEF1BQ0VAM2 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
RASGEF1BQ0VAM2 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RASGEF1BQ0VAM2 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
RASGEF1BQ0VAM2 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.67■□□□□ 0.74
RASGEF1BQ0VAM2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RASGEF1BQ0VAM2 BX842568.3-201ENST00000418104 571 ntBASIC19.67■□□□□ 0.74
RASGEF1BQ0VAM2 OR2I1P-207ENST00000453522 948 ntBASIC19.67■□□□□ 0.74
RASGEF1BQ0VAM2 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
RASGEF1BQ0VAM2 AF213884.3-201ENST00000563833 479 ntBASIC19.67■□□□□ 0.74
RASGEF1BQ0VAM2 AC233992.3-201ENST00000607491 485 ntBASIC19.67■□□□□ 0.74
RASGEF1BQ0VAM2 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
RASGEF1BQ0VAM2 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
RASGEF1BQ0VAM2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
RASGEF1BQ0VAM2 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
RASGEF1BQ0VAM2 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.66■□□□□ 0.74
RASGEF1BQ0VAM2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RASGEF1BQ0VAM2 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
RASGEF1BQ0VAM2 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC19.66■□□□□ 0.74
RASGEF1BQ0VAM2 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RASGEF1BQ0VAM2 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RASGEF1BQ0VAM2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RASGEF1BQ0VAM2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.66■□□□□ 0.74
RASGEF1BQ0VAM2 SLC47A1P1-202ENST00000449666 945 ntBASIC19.66■□□□□ 0.74
RASGEF1BQ0VAM2 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RASGEF1BQ0VAM2 SUDS3P1-201ENST00000505831 966 ntBASIC19.66■□□□□ 0.74
RASGEF1BQ0VAM2 AP001330.3-201ENST00000520123 633 ntBASIC19.66■□□□□ 0.74
RASGEF1BQ0VAM2 AC027682.1-201ENST00000562846 899 ntBASIC19.66■□□□□ 0.74
RASGEF1BQ0VAM2 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RASGEF1BQ0VAM2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
RASGEF1BQ0VAM2 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RASGEF1BQ0VAM2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RASGEF1BQ0VAM2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
RASGEF1BQ0VAM2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.66■□□□□ 0.74
RASGEF1BQ0VAM2 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.66■□□□□ 0.74
RASGEF1BQ0VAM2 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC19.66■□□□□ 0.74
RASGEF1BQ0VAM2 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
RASGEF1BQ0VAM2 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
RASGEF1BQ0VAM2 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.65■□□□□ 0.74
RASGEF1BQ0VAM2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RASGEF1BQ0VAM2 AL136967.2-201ENST00000623968 743 ntBASIC19.65■□□□□ 0.74
RASGEF1BQ0VAM2 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
RASGEF1BQ0VAM2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RASGEF1BQ0VAM2 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
RASGEF1BQ0VAM2 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
RASGEF1BQ0VAM2 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
RASGEF1BQ0VAM2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.64■□□□□ 0.74
RASGEF1BQ0VAM2 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
RASGEF1BQ0VAM2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
RASGEF1BQ0VAM2 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms