Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CCL20P78556 AC144652.1-201ENST00000609974 1624 ntBASIC17.14■□□□□ 0.33
CCL20P78556 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCL20P78556 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CCL20P78556 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCL20P78556 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CCL20P78556 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC17.13■□□□□ 0.33
CCL20P78556 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CCL20P78556 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CCL20P78556 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC17.13■□□□□ 0.33
CCL20P78556 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CCL20P78556 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.13■□□□□ 0.33
CCL20P78556 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CCL20P78556 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.13■□□□□ 0.33
CCL20P78556 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.13■□□□□ 0.33
CCL20P78556 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
CCL20P78556 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCL20P78556 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCL20P78556 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.12■□□□□ 0.33
CCL20P78556 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCL20P78556 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CCL20P78556 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CCL20P78556 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CCL20P78556 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CCL20P78556 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCL20P78556 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
CCL20P78556 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CCL20P78556 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.12■□□□□ 0.33
CCL20P78556 FEM1AP1-201ENST00000431297 1995 ntBASIC17.12■□□□□ 0.33
CCL20P78556 ECEL1P2-201ENST00000461596 1295 ntBASIC17.12■□□□□ 0.33
CCL20P78556 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CCL20P78556 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CCL20P78556 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCL20P78556 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.12■□□□□ 0.33
CCL20P78556 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.12■□□□□ 0.33
CCL20P78556 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCL20P78556 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CCL20P78556 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.12■□□□□ 0.33
CCL20P78556 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CCL20P78556 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCL20P78556 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCL20P78556 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CCL20P78556 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCL20P78556 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCL20P78556 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.11■□□□□ 0.33
CCL20P78556 METRNL-202ENST00000570778 967 ntTSL 5 BASIC17.11■□□□□ 0.33
CCL20P78556 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CCL20P78556 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.11■□□□□ 0.33
CCL20P78556 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CCL20P78556 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCL20P78556 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CCL20P78556 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.11■□□□□ 0.33
CCL20P78556 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL20P78556 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCL20P78556 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.1■□□□□ 0.33
CCL20P78556 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL20P78556 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.1■□□□□ 0.33
CCL20P78556 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.1■□□□□ 0.33
CCL20P78556 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
CCL20P78556 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL20P78556 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL20P78556 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL20P78556 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCL20P78556 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CCL20P78556 AL592295.1-201ENST00000400984 884 ntBASIC17.1■□□□□ 0.33
CCL20P78556 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
CCL20P78556 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL20P78556 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CCL20P78556 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.1■□□□□ 0.33
CCL20P78556 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.1■□□□□ 0.33
CCL20P78556 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL20P78556 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CCL20P78556 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL20P78556 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CCL20P78556 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC17.1■□□□□ 0.33
CCL20P78556 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL20P78556 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL20P78556 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC17.09■□□□□ 0.33
CCL20P78556 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC17.09■□□□□ 0.33
CCL20P78556 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.09■□□□□ 0.33
CCL20P78556 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.09■□□□□ 0.33
CCL20P78556 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL20P78556 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL20P78556 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCL20P78556 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL20P78556 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL20P78556 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL20P78556 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.09■□□□□ 0.33
CCL20P78556 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CCL20P78556 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CCL20P78556 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.33
CCL20P78556 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCL20P78556 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
CCL20P78556 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.08■□□□□ 0.33
CCL20P78556 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCL20P78556 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCL20P78556 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL20P78556 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
CCL20P78556 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCL20P78556 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms