Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.59■□□□□ 0.89
TRA2BP62995 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRA2BP62995 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRA2BP62995 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRA2BP62995 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRA2BP62995 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRA2BP62995 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.58■□□□□ 0.89
TRA2BP62995 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.58■□□□□ 0.89
TRA2BP62995 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.58■□□□□ 0.88
TRA2BP62995 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.58■□□□□ 0.88
TRA2BP62995 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
TRA2BP62995 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRA2BP62995 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRA2BP62995 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRA2BP62995 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRA2BP62995 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRA2BP62995 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
TRA2BP62995 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRA2BP62995 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRA2BP62995 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TRA2BP62995 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.57■□□□□ 0.88
TRA2BP62995 SLC47A1P1-202ENST00000449666 945 ntBASIC20.57■□□□□ 0.88
TRA2BP62995 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRA2BP62995 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRA2BP62995 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRA2BP62995 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TRA2BP62995 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.56■□□□□ 0.88
TRA2BP62995 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TRA2BP62995 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.56■□□□□ 0.88
TRA2BP62995 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRA2BP62995 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRA2BP62995 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.56■□□□□ 0.88
TRA2BP62995 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TRA2BP62995 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.56■□□□□ 0.88
TRA2BP62995 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRA2BP62995 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TRA2BP62995 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.56■□□□□ 0.88
TRA2BP62995 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
TRA2BP62995 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TRA2BP62995 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRA2BP62995 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRA2BP62995 OXCT2P1-201ENST00000447263 1535 ntBASIC20.55■□□□□ 0.88
TRA2BP62995 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
TRA2BP62995 BX842568.3-201ENST00000418104 571 ntBASIC20.55■□□□□ 0.88
TRA2BP62995 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.55■□□□□ 0.88
TRA2BP62995 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TRA2BP62995 AL136162.1-201ENST00000607711 1078 ntBASIC20.55■□□□□ 0.88
TRA2BP62995 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.55■□□□□ 0.88
TRA2BP62995 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.55■□□□□ 0.88
TRA2BP62995 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.55■□□□□ 0.88
TRA2BP62995 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.55■□□□□ 0.88
TRA2BP62995 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
TRA2BP62995 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRA2BP62995 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRA2BP62995 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRA2BP62995 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TRA2BP62995 OR7E47P-201ENST00000546390 1422 ntBASIC20.54■□□□□ 0.88
TRA2BP62995 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRA2BP62995 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRA2BP62995 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.54■□□□□ 0.88
TRA2BP62995 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.54■□□□□ 0.88
TRA2BP62995 MIR4767-201ENST00000582827 78 ntBASIC20.54■□□□□ 0.88
TRA2BP62995 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.54■□□□□ 0.88
TRA2BP62995 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
TRA2BP62995 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.54■□□□□ 0.88
TRA2BP62995 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TRA2BP62995 AC135279.3-201ENST00000610945 1311 ntBASIC20.53■□□□□ 0.88
TRA2BP62995 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRA2BP62995 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRA2BP62995 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TRA2BP62995 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
TRA2BP62995 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TRA2BP62995 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRA2BP62995 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRA2BP62995 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRA2BP62995 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRA2BP62995 AC024257.2-201ENST00000549699 147 ntBASIC20.53■□□□□ 0.88
TRA2BP62995 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.53■□□□□ 0.88
TRA2BP62995 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.53■□□□□ 0.88
TRA2BP62995 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TRA2BP62995 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRA2BP62995 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRA2BP62995 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TRA2BP62995 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRA2BP62995 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
TRA2BP62995 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.52■□□□□ 0.88
TRA2BP62995 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRA2BP62995 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TRA2BP62995 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRA2BP62995 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRA2BP62995 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TRA2BP62995 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
TRA2BP62995 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRA2BP62995 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TRA2BP62995 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
TRA2BP62995 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TRA2BP62995 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRA2BP62995 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
TRA2BP62995 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TRA2BP62995 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms