Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
PER3P56645 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PER3P56645 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
PER3P56645 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20■□□□□ 0.79
PER3P56645 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PER3P56645 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PER3P56645 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PER3P56645 C9orf163-202ENST00000624034 2573 ntBASIC19.99■□□□□ 0.79
PER3P56645 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
PER3P56645 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PER3P56645 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.99■□□□□ 0.79
PER3P56645 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PER3P56645 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PER3P56645 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PER3P56645 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PER3P56645 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PER3P56645 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PER3P56645 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PER3P56645 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PER3P56645 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PER3P56645 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PER3P56645 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PER3P56645 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.98■□□□□ 0.79
PER3P56645 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.98■□□□□ 0.79
PER3P56645 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
PER3P56645 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PER3P56645 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PER3P56645 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.98■□□□□ 0.79
PER3P56645 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.98■□□□□ 0.79
PER3P56645 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PER3P56645 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PER3P56645 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PER3P56645 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PER3P56645 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC19.98■□□□□ 0.79
PER3P56645 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PER3P56645 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.98■□□□□ 0.79
PER3P56645 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PER3P56645 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PER3P56645 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PER3P56645 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PER3P56645 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PER3P56645 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
PER3P56645 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.97■□□□□ 0.79
PER3P56645 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.97■□□□□ 0.79
PER3P56645 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PER3P56645 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PER3P56645 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PER3P56645 TERF1P2-201ENST00000583350 1212 ntBASIC19.97■□□□□ 0.79
PER3P56645 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.97■□□□□ 0.79
PER3P56645 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
PER3P56645 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
PER3P56645 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
PER3P56645 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PER3P56645 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PER3P56645 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PER3P56645 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.97■□□□□ 0.79
PER3P56645 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PER3P56645 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.96■□□□□ 0.79
PER3P56645 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PER3P56645 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PER3P56645 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PER3P56645 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
PER3P56645 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PER3P56645 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PER3P56645 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
PER3P56645 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PER3P56645 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC19.96■□□□□ 0.79
PER3P56645 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PER3P56645 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PER3P56645 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PER3P56645 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PER3P56645 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PER3P56645 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.95■□□□□ 0.78
PER3P56645 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC19.95■□□□□ 0.78
PER3P56645 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PER3P56645 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.95■□□□□ 0.78
PER3P56645 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.95■□□□□ 0.78
PER3P56645 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PER3P56645 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PER3P56645 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PER3P56645 C1orf229-201ENST00000623686 2258 ntBASIC19.95■□□□□ 0.78
PER3P56645 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC19.95■□□□□ 0.78
PER3P56645 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PER3P56645 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PER3P56645 EP400NL-214ENST00000641289 2402 ntBASIC19.94■□□□□ 0.78
PER3P56645 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PER3P56645 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PER3P56645 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PER3P56645 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.94■□□□□ 0.78
PER3P56645 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PER3P56645 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.94■□□□□ 0.78
PER3P56645 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.94■□□□□ 0.78
PER3P56645 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.94■□□□□ 0.78
PER3P56645 AC016769.1-201ENST00000409132 1010 ntBASIC19.94■□□□□ 0.78
PER3P56645 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
PER3P56645 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.94■□□□□ 0.78
PER3P56645 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
PER3P56645 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.94■□□□□ 0.78
PER3P56645 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.94■□□□□ 0.78
PER3P56645 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms