Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CDH12P55289 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDH12P55289 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.21■□□□□ 0.83
CDH12P55289 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH12P55289 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDH12P55289 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.21■□□□□ 0.83
CDH12P55289 DUX4L4-201ENST00000566884 1269 ntBASIC20.21■□□□□ 0.83
CDH12P55289 AC009086.3-201ENST00000623486 1008 ntBASIC20.21■□□□□ 0.83
CDH12P55289 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH12P55289 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH12P55289 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.21■□□□□ 0.83
CDH12P55289 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH12P55289 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDH12P55289 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CDH12P55289 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.2■□□□□ 0.82
CDH12P55289 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH12P55289 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH12P55289 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CDH12P55289 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.2■□□□□ 0.82
CDH12P55289 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CDH12P55289 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CDH12P55289 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CDH12P55289 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH12P55289 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDH12P55289 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CDH12P55289 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.2■□□□□ 0.82
CDH12P55289 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.2■□□□□ 0.82
CDH12P55289 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH12P55289 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDH12P55289 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
CDH12P55289 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH12P55289 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDH12P55289 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CDH12P55289 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDH12P55289 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDH12P55289 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDH12P55289 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CDH12P55289 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CDH12P55289 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH12P55289 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.19■□□□□ 0.82
CDH12P55289 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CDH12P55289 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CDH12P55289 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH12P55289 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDH12P55289 UNC93B8-201ENST00000511903 705 ntBASIC20.19■□□□□ 0.82
CDH12P55289 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.19■□□□□ 0.82
CDH12P55289 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.19■□□□□ 0.82
CDH12P55289 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH12P55289 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.19■□□□□ 0.82
CDH12P55289 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH12P55289 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH12P55289 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CDH12P55289 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDH12P55289 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CDH12P55289 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH12P55289 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH12P55289 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CDH12P55289 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH12P55289 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH12P55289 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH12P55289 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH12P55289 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH12P55289 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH12P55289 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH12P55289 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH12P55289 CREM-229ENST00000474362 1030 ntTSL 2 BASIC20.18■□□□□ 0.82
CDH12P55289 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.18■□□□□ 0.82
CDH12P55289 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDH12P55289 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CDH12P55289 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.17■□□□□ 0.82
CDH12P55289 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.17■□□□□ 0.82
CDH12P55289 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CDH12P55289 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDH12P55289 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH12P55289 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH12P55289 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.17■□□□□ 0.82
CDH12P55289 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CDH12P55289 C17orf82-201ENST00000623772 1530 ntBASIC20.17■□□□□ 0.82
CDH12P55289 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH12P55289 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CDH12P55289 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH12P55289 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH12P55289 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH12P55289 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.16■□□□□ 0.82
CDH12P55289 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH12P55289 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH12P55289 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH12P55289 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDH12P55289 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDH12P55289 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.16■□□□□ 0.82
CDH12P55289 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.16■□□□□ 0.82
CDH12P55289 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
CDH12P55289 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CDH12P55289 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CDH12P55289 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH12P55289 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.16■□□□□ 0.82
CDH12P55289 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CDH12P55289 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
CDH12P55289 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CDH12P55289 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms