Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.21■□□□□ 0.83
PSMD4P55036 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.21■□□□□ 0.83
PSMD4P55036 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
PSMD4P55036 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC20.21■□□□□ 0.83
PSMD4P55036 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC20.21■□□□□ 0.83
PSMD4P55036 MIR4767-201ENST00000582827 78 ntBASIC20.21■□□□□ 0.83
PSMD4P55036 AC106739.1-201ENST00000617035 715 ntBASIC20.21■□□□□ 0.83
PSMD4P55036 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PSMD4P55036 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PSMD4P55036 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
PSMD4P55036 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PSMD4P55036 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.83
PSMD4P55036 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PSMD4P55036 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
PSMD4P55036 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
PSMD4P55036 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PSMD4P55036 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PSMD4P55036 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
PSMD4P55036 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.2■□□□□ 0.82
PSMD4P55036 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
PSMD4P55036 AL031602.1-201ENST00000633169 911 ntBASIC20.2■□□□□ 0.82
PSMD4P55036 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
PSMD4P55036 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PSMD4P55036 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
PSMD4P55036 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
PSMD4P55036 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PSMD4P55036 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PSMD4P55036 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PSMD4P55036 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
PSMD4P55036 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PSMD4P55036 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.19■□□□□ 0.82
PSMD4P55036 BX842568.3-201ENST00000418104 571 ntBASIC20.19■□□□□ 0.82
PSMD4P55036 AL139246.5-201ENST00000606645 996 ntBASIC20.19■□□□□ 0.82
PSMD4P55036 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
PSMD4P55036 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.19■□□□□ 0.82
PSMD4P55036 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.19■□□□□ 0.82
PSMD4P55036 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PSMD4P55036 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PSMD4P55036 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PSMD4P55036 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PSMD4P55036 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PSMD4P55036 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PSMD4P55036 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PSMD4P55036 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.18■□□□□ 0.82
PSMD4P55036 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PSMD4P55036 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PSMD4P55036 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PSMD4P55036 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.18■□□□□ 0.82
PSMD4P55036 CA15P2-201ENST00000611168 834 ntBASIC20.18■□□□□ 0.82
PSMD4P55036 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PSMD4P55036 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PSMD4P55036 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PSMD4P55036 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PSMD4P55036 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PSMD4P55036 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PSMD4P55036 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PSMD4P55036 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PSMD4P55036 EDA-201ENST00000338901 1233 ntBASIC20.17■□□□□ 0.82
PSMD4P55036 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.17■□□□□ 0.82
PSMD4P55036 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.17■□□□□ 0.82
PSMD4P55036 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PSMD4P55036 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
PSMD4P55036 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PSMD4P55036 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PSMD4P55036 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PSMD4P55036 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
PSMD4P55036 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.16■□□□□ 0.82
PSMD4P55036 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PSMD4P55036 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PSMD4P55036 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.16■□□□□ 0.82
PSMD4P55036 SLC47A1P1-202ENST00000449666 945 ntBASIC20.16■□□□□ 0.82
PSMD4P55036 AP005435.1-201ENST00000529293 1178 ntBASIC20.16■□□□□ 0.82
PSMD4P55036 AC133561.4-201ENST00000566112 224 ntBASIC20.16■□□□□ 0.82
PSMD4P55036 AC110285.6-201ENST00000617652 491 ntBASIC20.16■□□□□ 0.82
PSMD4P55036 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.16■□□□□ 0.82
PSMD4P55036 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
PSMD4P55036 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.16■□□□□ 0.82
PSMD4P55036 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PSMD4P55036 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PSMD4P55036 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PSMD4P55036 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PSMD4P55036 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
PSMD4P55036 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PSMD4P55036 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
PSMD4P55036 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
PSMD4P55036 AC233992.3-201ENST00000607491 485 ntBASIC20.15■□□□□ 0.82
PSMD4P55036 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
PSMD4P55036 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.15■□□□□ 0.82
PSMD4P55036 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
PSMD4P55036 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PSMD4P55036 LINC00526-201ENST00000581067 1875 ntBASIC20.15■□□□□ 0.82
PSMD4P55036 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
PSMD4P55036 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PSMD4P55036 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PSMD4P55036 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.14■□□□□ 0.81
PSMD4P55036 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.14■□□□□ 0.81
PSMD4P55036 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PSMD4P55036 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
PSMD4P55036 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.14■□□□□ 0.81
PSMD4P55036 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms