Protein–RNA interactions for Protein: P50479

PDLIM4, PDZ and LIM domain protein 4, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4P50479 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.45■□□□□ 0.54
PDLIM4P50479 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.45■□□□□ 0.54
PDLIM4P50479 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM4P50479 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM4P50479 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM4P50479 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM4P50479 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDLIM4P50479 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.44■□□□□ 0.54
PDLIM4P50479 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
PDLIM4P50479 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
PDLIM4P50479 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM4P50479 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.44■□□□□ 0.54
PDLIM4P50479 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM4P50479 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM4P50479 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
PDLIM4P50479 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
PDLIM4P50479 AC010141.3-201ENST00000456659 717 ntBASIC18.44■□□□□ 0.54
PDLIM4P50479 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.44■□□□□ 0.54
PDLIM4P50479 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.44■□□□□ 0.54
PDLIM4P50479 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
PDLIM4P50479 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.44■□□□□ 0.54
PDLIM4P50479 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM4P50479 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM4P50479 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM4P50479 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM4P50479 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM4P50479 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PDLIM4P50479 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM4P50479 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM4P50479 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM4P50479 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PDLIM4P50479 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM4P50479 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.43■□□□□ 0.54
PDLIM4P50479 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
PDLIM4P50479 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
PDLIM4P50479 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PDLIM4P50479 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.43■□□□□ 0.54
PDLIM4P50479 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.43■□□□□ 0.54
PDLIM4P50479 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.43■□□□□ 0.54
PDLIM4P50479 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.43■□□□□ 0.54
PDLIM4P50479 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PDLIM4P50479 AL353803.4-201ENST00000565882 1934 ntBASIC18.43■□□□□ 0.54
PDLIM4P50479 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.42■□□□□ 0.54
PDLIM4P50479 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.42■□□□□ 0.54
PDLIM4P50479 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.42■□□□□ 0.54
PDLIM4P50479 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.42■□□□□ 0.54
PDLIM4P50479 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.42■□□□□ 0.54
PDLIM4P50479 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM4P50479 AL024507.2-201ENST00000606070 2574 ntBASIC18.42■□□□□ 0.54
PDLIM4P50479 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM4P50479 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PDLIM4P50479 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PDLIM4P50479 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.42■□□□□ 0.54
PDLIM4P50479 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM4P50479 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM4P50479 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM4P50479 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
PDLIM4P50479 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM4P50479 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
PDLIM4P50479 BX005040.4-201ENST00000637145 1518 ntBASIC18.41■□□□□ 0.54
PDLIM4P50479 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.41■□□□□ 0.54
PDLIM4P50479 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM4P50479 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.41■□□□□ 0.54
PDLIM4P50479 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.41■□□□□ 0.54
PDLIM4P50479 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.41■□□□□ 0.54
PDLIM4P50479 AC004812.2-201ENST00000611079 2094 ntBASIC18.41■□□□□ 0.54
PDLIM4P50479 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM4P50479 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM4P50479 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM4P50479 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM4P50479 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.41■□□□□ 0.54
PDLIM4P50479 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM4P50479 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PDLIM4P50479 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.41■□□□□ 0.54
PDLIM4P50479 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM4P50479 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM4P50479 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM4P50479 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM4P50479 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM4P50479 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.4■□□□□ 0.54
PDLIM4P50479 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM4P50479 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
PDLIM4P50479 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.4■□□□□ 0.54
PDLIM4P50479 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM4P50479 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM4P50479 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PDLIM4P50479 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PDLIM4P50479 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PDLIM4P50479 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
PDLIM4P50479 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.39■□□□□ 0.54
PDLIM4P50479 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDLIM4P50479 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PDLIM4P50479 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC18.39■□□□□ 0.53
PDLIM4P50479 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.39■□□□□ 0.53
PDLIM4P50479 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDLIM4P50479 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDLIM4P50479 TPRG1LP1-201ENST00000598702 760 ntBASIC18.39■□□□□ 0.53
PDLIM4P50479 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.39■□□□□ 0.53
PDLIM4P50479 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PDLIM4P50479 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms