Protein–RNA interactions for Protein: P48412

UPF3, Nonsense-mediated mRNA decay protein 3, yeastyeast

Known RBP Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UPF3P48412 YLR444CYLR444C 303 nt4.2□□□□□ -1.74
UPF3P48412 RSF1YMR030W 1131 nt4.2□□□□□ -1.74
UPF3P48412 SSO2YMR183C 888 nt4.2□□□□□ -1.74
UPF3P48412 TOM7YNL070W 183 nt4.2□□□□□ -1.74
UPF3P48412 IST1YNL265C 897 nt4.2□□□□□ -1.74
UPF3P48412 ATG19YOL082W 1248 nt4.2□□□□□ -1.74
UPF3P48412 RPS19AYOL121C 435 nt4.2□□□□□ -1.74
UPF3P48412 FUN12YAL035W 3009 nt4.2□□□□□ -1.74
UPF3P48412 TRS85YDR108W 2097 nt4.2□□□□□ -1.74
UPF3P48412 EGT2YNL327W 3126 nt4.19□□□□□ -1.74
UPF3P48412 NUG1YER006W 1563 nt4.19□□□□□ -1.74
UPF3P48412 PGS1YCL004W 1566 nt4.19□□□□□ -1.74
UPF3P48412 POL1YNL102W 4407 nt4.19□□□□□ -1.74
UPF3P48412 MGA1YGR249W 1371 nt4.19□□□□□ -1.74
UPF3P48412 RTC1YOL138C 4026 nt4.19□□□□□ -1.74
UPF3P48412 GRX3YDR098C 858 nt4.19□□□□□ -1.74
UPF3P48412 YDR124WYDR124W 975 nt4.19□□□□□ -1.74
UPF3P48412 YGL088WYGL088W 366 nt4.19□□□□□ -1.74
UPF3P48412 HYM1YKL189W 1200 nt4.19□□□□□ -1.74
UPF3P48412 IRC25YLR021W 540 nt4.19□□□□□ -1.74
UPF3P48412 YAR030CYAR030C 342 nt4.19□□□□□ -1.74
UPF3P48412 YLR407WYLR407W 687 nt4.19□□□□□ -1.74
UPF3P48412 MTG1YMR097C 1104 nt4.19□□□□□ -1.74
UPF3P48412 RCL1YOL010W 1104 nt4.19□□□□□ -1.74
UPF3P48412 TFB6YOR352W 1032 nt4.19□□□□□ -1.74
UPF3P48412 ATG5YPL149W 885 nt4.19□□□□□ -1.74
UPF3P48412 YBR096WYBR096W 693 nt4.19□□□□□ -1.74
UPF3P48412 YBR242WYBR242W 717 nt4.19□□□□□ -1.74
UPF3P48412 MIC60YKR016W 1623 nt4.19□□□□□ -1.74
UPF3P48412 CUE3YGL110C 1875 nt4.19□□□□□ -1.74
UPF3P48412 DAP2YHR028C 2457 nt4.19□□□□□ -1.74
UPF3P48412 YIL171WYIL171W 330 nt4.18□□□□□ -1.74
UPF3P48412 MRPL49YJL096W 486 nt4.18□□□□□ -1.74
UPF3P48412 YJR071WYJR071W 369 nt4.18□□□□□ -1.74
UPF3P48412 YML047W-AYML047W-A 366 nt4.18□□□□□ -1.74
UPF3P48412 YNL035CYNL035C 1170 nt4.18□□□□□ -1.74
UPF3P48412 DSC2YOL073C 969 nt4.18□□□□□ -1.74
UPF3P48412 YJR061WYJR061W 2808 nt4.18□□□□□ -1.74
UPF3P48412 EPO1YMR124W 2832 nt4.18□□□□□ -1.74
UPF3P48412 MCD4YKL165C 2760 nt4.18□□□□□ -1.74
UPF3P48412 MCP2YLR253W 1710 nt4.18□□□□□ -1.74
UPF3P48412 PEP5YMR231W 3090 nt4.18□□□□□ -1.74
UPF3P48412 ULP1YPL020C 1866 nt4.18□□□□□ -1.74
UPF3P48412 KIC1YHR102W 3243 nt4.17□□□□□ -1.74
UPF3P48412 UPC2YDR213W 2742 nt4.17□□□□□ -1.74
UPF3P48412 CEG1YGL130W 1380 nt4.17□□□□□ -1.74
UPF3P48412 YIL001WYIL001W 1542 nt4.17□□□□□ -1.74
UPF3P48412 RXT3YDL076C 885 nt4.17□□□□□ -1.74
UPF3P48412 CYM1YDR430C 2970 nt4.17□□□□□ -1.74
UPF3P48412 ARC19YKL013C 516 nt4.17□□□□□ -1.74
UPF3P48412 YNL217WYNL217W 981 nt4.17□□□□□ -1.74
UPF3P48412 MRPL51YPR100W 423 nt4.17□□□□□ -1.74
UPF3P48412 MRP2YPR166C 348 nt4.17□□□□□ -1.74
UPF3P48412 FLO8YER109C 2400 nt4.17□□□□□ -1.74
UPF3P48412 KIP3YGL216W 2418 nt4.17□□□□□ -1.74
UPF3P48412 SEC59YMR013C 1560 nt4.17□□□□□ -1.74
UPF3P48412 CAF130YGR134W 3369 nt4.17□□□□□ -1.74
UPF3P48412 TRF5YNL299W 1929 nt4.17□□□□□ -1.74
UPF3P48412 JHD2YJR119C 2187 nt4.16□□□□□ -1.74
UPF3P48412 PLM2YDR501W 1566 nt4.16□□□□□ -1.74
UPF3P48412 YPK9YOR291W 4419 nt4.16□□□□□ -1.74
UPF3P48412 OCA4YCR095C 1089 nt4.16□□□□□ -1.74
UPF3P48412 snR78snR78 87 nt4.16□□□□□ -1.74
UPF3P48412 YER138W-AYER138W-A 105 nt4.16□□□□□ -1.74
UPF3P48412 GAT3YLR013W 426 nt4.16□□□□□ -1.74
UPF3P48412 SEC72YLR292C 582 nt4.16□□□□□ -1.74
UPF3P48412 YIP3YNL044W 531 nt4.16□□□□□ -1.74
UPF3P48412 YBL107W-AYBL107W-A 105 nt4.16□□□□□ -1.74
UPF3P48412 YOR342CYOR342C 960 nt4.16□□□□□ -1.74
UPF3P48412 SPP381YBR152W 876 nt4.16□□□□□ -1.74
UPF3P48412 HOS3YPL116W 2094 nt4.16□□□□□ -1.74
UPF3P48412 RAD1YPL022W 3303 nt4.16□□□□□ -1.74
UPF3P48412 NHP10YDL002C 612 nt4.15□□□□□ -1.75
UPF3P48412 PRP11YDL043C 801 nt4.15□□□□□ -1.75
UPF3P48412 YDR355CYDR355C 303 nt4.15□□□□□ -1.75
UPF3P48412 UBC8YEL012W 657 nt4.15□□□□□ -1.75
UPF3P48412 PET130YJL023C 1044 nt4.15□□□□□ -1.75
UPF3P48412 ACP1YKL192C 378 nt4.15□□□□□ -1.75
UPF3P48412 COS1YNL336W 1146 nt4.15□□□□□ -1.75
UPF3P48412 CSH1YBR161W 1131 nt4.15□□□□□ -1.75
UPF3P48412 PBN1YCL052C 1251 nt4.15□□□□□ -1.75
UPF3P48412 LYP1YNL268W 1836 nt4.15□□□□□ -1.75
UPF3P48412 TOG1YER184C 2385 nt4.15□□□□□ -1.75
UPF3P48412 TEC1YBR083W 1461 nt4.15□□□□□ -1.75
UPF3P48412 KAR1YNL188W 1302 nt4.15□□□□□ -1.75
UPF3P48412 YPL109CYPL109C 1974 nt4.14□□□□□ -1.75
UPF3P48412 FAR10YLR238W 1437 nt4.14□□□□□ -1.75
UPF3P48412 SPT16YGL207W 3108 nt4.14□□□□□ -1.75
UPF3P48412 snR7-LsnR7-L 214 nt4.14□□□□□ -1.75
UPF3P48412 YGL006W-AYGL006W-A 111 nt4.14□□□□□ -1.75
UPF3P48412 SDS3YIL084C 984 nt4.14□□□□□ -1.75
UPF3P48412 HOT13YKL084W 351 nt4.14□□□□□ -1.75
UPF3P48412 RAD27YKL113C 1149 nt4.14□□□□□ -1.75
UPF3P48412 GAB1YLR459W 1185 nt4.14□□□□□ -1.75
UPF3P48412 YMR310CYMR310C 954 nt4.14□□□□□ -1.75
UPF3P48412 SYC1YOR179C 567 nt4.14□□□□□ -1.75
UPF3P48412 YBR103C-AYBR103C-A 144 nt4.14□□□□□ -1.75
UPF3P48412 YLR152CYLR152C 1731 nt4.14□□□□□ -1.75
UPF3P48412 UBX5YDR330W 1503 nt4.14□□□□□ -1.75
UPF3P48412 ACK1YDL203C 1872 nt4.13□□□□□ -1.75
Retrieved 100 of 7,029 protein–RNA pairs in 17.2 ms