Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC24.85■■□□□ 1.57
HTTP42858 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC24.85■■□□□ 1.57
HTTP42858 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC24.85■■□□□ 1.57
HTTP42858 AP006294.2-201ENST00000641667 209 ntBASIC24.85■■□□□ 1.57
HTTP42858 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
HTTP42858 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
HTTP42858 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
HTTP42858 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC24.84■■□□□ 1.57
HTTP42858 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC24.84■■□□□ 1.57
HTTP42858 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
HTTP42858 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
HTTP42858 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
HTTP42858 AC004687.1-201ENST00000579003 1625 ntBASIC24.84■■□□□ 1.57
HTTP42858 FP325331.1-202ENST00000623531 1380 ntBASIC24.84■■□□□ 1.57
HTTP42858 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
HTTP42858 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
HTTP42858 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
HTTP42858 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
HTTP42858 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC24.84■■□□□ 1.57
HTTP42858 USP36-216ENST00000589424 970 ntTSL 5 BASIC24.84■■□□□ 1.57
HTTP42858 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC24.84■■□□□ 1.57
HTTP42858 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC24.84■■□□□ 1.57
HTTP42858 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
HTTP42858 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC24.83■■□□□ 1.57
HTTP42858 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
HTTP42858 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC24.83■■□□□ 1.57
HTTP42858 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
HTTP42858 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC24.83■■□□□ 1.57
HTTP42858 ADM-205ENST00000528544 586 ntTSL 2 BASIC24.83■■□□□ 1.57
HTTP42858 EI24-213ENST00000618552 1747 ntTSL 5 BASIC24.83■■□□□ 1.57
HTTP42858 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC24.83■■□□□ 1.56
HTTP42858 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
HTTP42858 AC022211.4-201ENST00000625094 2161 ntBASIC24.83■■□□□ 1.56
HTTP42858 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC24.82■■□□□ 1.56
HTTP42858 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC24.82■■□□□ 1.56
HTTP42858 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
HTTP42858 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC24.82■■□□□ 1.56
HTTP42858 AC128676.1-201ENST00000454392 318 ntBASIC24.82■■□□□ 1.56
HTTP42858 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC24.82■■□□□ 1.56
HTTP42858 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC24.82■■□□□ 1.56
HTTP42858 MKRN4P-201ENST00000444706 1521 ntBASIC24.82■■□□□ 1.56
HTTP42858 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
HTTP42858 UNC93B4-201ENST00000505679 747 ntBASIC24.81■■□□□ 1.56
HTTP42858 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC24.81■■□□□ 1.56
HTTP42858 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
HTTP42858 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC24.81■■□□□ 1.56
HTTP42858 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC24.81■■□□□ 1.56
HTTP42858 MYCNOS-205ENST00000641950 531 ntBASIC24.81■■□□□ 1.56
HTTP42858 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
HTTP42858 AL158047.1-201ENST00000445918 881 ntBASIC24.81■■□□□ 1.56
HTTP42858 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC24.81■■□□□ 1.56
HTTP42858 RHEB-204ENST00000472642 900 ntTSL 3 BASIC24.81■■□□□ 1.56
HTTP42858 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC24.81■■□□□ 1.56
HTTP42858 MYC-209ENST00000641252 345 ntBASIC24.81■■□□□ 1.56
HTTP42858 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
HTTP42858 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC24.8■■□□□ 1.56
HTTP42858 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
HTTP42858 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
HTTP42858 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
HTTP42858 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC24.8■■□□□ 1.56
HTTP42858 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC24.8■■□□□ 1.56
HTTP42858 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC24.8■■□□□ 1.56
HTTP42858 MIR4758-201ENST00000577688 71 ntBASIC24.8■■□□□ 1.56
HTTP42858 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC24.8■■□□□ 1.56
HTTP42858 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
HTTP42858 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
HTTP42858 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
HTTP42858 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
HTTP42858 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
HTTP42858 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
HTTP42858 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC24.79■■□□□ 1.56
HTTP42858 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC24.79■■□□□ 1.56
HTTP42858 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.79■■□□□ 1.56
HTTP42858 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
HTTP42858 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC24.79■■□□□ 1.56
HTTP42858 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
HTTP42858 CYP2T1P-201ENST00000432607 1285 ntBASIC24.79■■□□□ 1.56
HTTP42858 DUSP8P5-201ENST00000422884 1815 ntBASIC24.79■■□□□ 1.56
HTTP42858 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
HTTP42858 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
HTTP42858 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
HTTP42858 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC24.79■■□□□ 1.56
HTTP42858 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC24.79■■□□□ 1.56
HTTP42858 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC24.79■■□□□ 1.56
HTTP42858 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
HTTP42858 AC006058.3-201ENST00000606217 1069 ntBASIC24.79■■□□□ 1.56
HTTP42858 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
HTTP42858 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
HTTP42858 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC24.78■■□□□ 1.56
HTTP42858 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
HTTP42858 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
HTTP42858 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
HTTP42858 AC010536.3-201ENST00000620306 533 ntBASIC24.78■■□□□ 1.56
HTTP42858 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC24.78■■□□□ 1.56
HTTP42858 MFF-207ENST00000409565 1548 ntTSL 2 BASIC24.78■■□□□ 1.56
HTTP42858 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC24.78■■□□□ 1.56
HTTP42858 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC24.78■■□□□ 1.56
HTTP42858 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
HTTP42858 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.77■■□□□ 1.56
HTTP42858 RPS2P4-201ENST00000476944 856 ntBASIC24.77■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms