Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
APOBEC1P41238 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
APOBEC1P41238 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.69■□□□□ 0.74
APOBEC1P41238 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
APOBEC1P41238 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC19.68■□□□□ 0.74
APOBEC1P41238 AC139530.1-201ENST00000575312 1977 ntBASIC19.68■□□□□ 0.74
APOBEC1P41238 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.68■□□□□ 0.74
APOBEC1P41238 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC19.68■□□□□ 0.74
APOBEC1P41238 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
APOBEC1P41238 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
APOBEC1P41238 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.68■□□□□ 0.74
APOBEC1P41238 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.68■□□□□ 0.74
APOBEC1P41238 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
APOBEC1P41238 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
APOBEC1P41238 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
APOBEC1P41238 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.68■□□□□ 0.74
APOBEC1P41238 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.68■□□□□ 0.74
APOBEC1P41238 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.68■□□□□ 0.74
APOBEC1P41238 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
APOBEC1P41238 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
APOBEC1P41238 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
APOBEC1P41238 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
APOBEC1P41238 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
APOBEC1P41238 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
APOBEC1P41238 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOBEC1P41238 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOBEC1P41238 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOBEC1P41238 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
APOBEC1P41238 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOBEC1P41238 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
APOBEC1P41238 AC099791.1-201ENST00000416440 715 ntBASIC19.67■□□□□ 0.74
APOBEC1P41238 AP001330.3-201ENST00000520123 633 ntBASIC19.67■□□□□ 0.74
APOBEC1P41238 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.67■□□□□ 0.74
APOBEC1P41238 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOBEC1P41238 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
APOBEC1P41238 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
APOBEC1P41238 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOBEC1P41238 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.66■□□□□ 0.74
APOBEC1P41238 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOBEC1P41238 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
APOBEC1P41238 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOBEC1P41238 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOBEC1P41238 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
APOBEC1P41238 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
APOBEC1P41238 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
APOBEC1P41238 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOBEC1P41238 MIR939-201ENST00000401314 82 ntBASIC19.66■□□□□ 0.74
APOBEC1P41238 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.66■□□□□ 0.74
APOBEC1P41238 AL031432.3-201ENST00000607698 485 ntBASIC19.66■□□□□ 0.74
APOBEC1P41238 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOBEC1P41238 RASA4CP-201ENST00000424092 1398 ntBASIC19.66■□□□□ 0.74
APOBEC1P41238 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
APOBEC1P41238 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
APOBEC1P41238 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
APOBEC1P41238 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC19.65■□□□□ 0.74
APOBEC1P41238 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.65■□□□□ 0.74
APOBEC1P41238 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
APOBEC1P41238 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC19.65■□□□□ 0.74
APOBEC1P41238 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.65■□□□□ 0.74
APOBEC1P41238 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.65■□□□□ 0.74
APOBEC1P41238 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.65■□□□□ 0.74
APOBEC1P41238 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
APOBEC1P41238 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC19.65■□□□□ 0.74
APOBEC1P41238 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.65■□□□□ 0.74
APOBEC1P41238 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
APOBEC1P41238 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.65■□□□□ 0.74
APOBEC1P41238 AC091305.1-201ENST00000479476 895 ntBASIC19.65■□□□□ 0.74
APOBEC1P41238 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
APOBEC1P41238 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
APOBEC1P41238 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.65■□□□□ 0.74
APOBEC1P41238 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
APOBEC1P41238 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
APOBEC1P41238 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
APOBEC1P41238 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
APOBEC1P41238 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
APOBEC1P41238 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
APOBEC1P41238 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
APOBEC1P41238 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
APOBEC1P41238 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
APOBEC1P41238 SUDS3P1-201ENST00000505831 966 ntBASIC19.64■□□□□ 0.73
APOBEC1P41238 IGHV3-19-201ENST00000521488 291 ntBASIC19.64■□□□□ 0.73
APOBEC1P41238 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.64■□□□□ 0.73
APOBEC1P41238 AF213884.3-201ENST00000563833 479 ntBASIC19.64■□□□□ 0.73
APOBEC1P41238 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
APOBEC1P41238 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
APOBEC1P41238 AL136967.2-201ENST00000623968 743 ntBASIC19.64■□□□□ 0.73
APOBEC1P41238 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
APOBEC1P41238 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
APOBEC1P41238 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
APOBEC1P41238 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
APOBEC1P41238 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
APOBEC1P41238 LINC00526-201ENST00000581067 1875 ntBASIC19.63■□□□□ 0.73
APOBEC1P41238 AC092053.2-201ENST00000640557 1818 ntBASIC19.63■□□□□ 0.73
APOBEC1P41238 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
APOBEC1P41238 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
APOBEC1P41238 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
APOBEC1P41238 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
APOBEC1P41238 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.63■□□□□ 0.73
APOBEC1P41238 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.63■□□□□ 0.73
APOBEC1P41238 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms