Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 STE6YKL209C 3873 nt4□□□□□ -1.77
RTR1P40084 YGL193CYGL193C 312 nt4□□□□□ -1.77
RTR1P40084 VMA22YHR060W 546 nt4□□□□□ -1.77
RTR1P40084 YAR1YPL239W 603 nt4□□□□□ -1.77
RTR1P40084 DIB1YPR082C 432 nt4□□□□□ -1.77
RTR1P40084 YLR152CYLR152C 1731 nt4□□□□□ -1.77
RTR1P40084 YLR352WYLR352W 2424 nt4□□□□□ -1.77
RTR1P40084 YHR080CYHR080C 4038 nt3.99□□□□□ -1.77
RTR1P40084 SOD1YJR104C 465 nt3.99□□□□□ -1.77
RTR1P40084 AHP1YLR109W 531 nt3.99□□□□□ -1.77
RTR1P40084 ARR1YPR199C 885 nt3.99□□□□□ -1.77
RTR1P40084 FRM2YCL026C-A 582 nt3.99□□□□□ -1.77
RTR1P40084 SET4YJL105W 1683 nt3.99□□□□□ -1.77
RTR1P40084 RRP5YMR229C 5190 nt3.98□□□□□ -1.77
RTR1P40084 NTO1YPR031W 2247 nt3.98□□□□□ -1.77
RTR1P40084 SWI1YPL016W 3945 nt3.98□□□□□ -1.77
RTR1P40084 ATP5YDR298C 639 nt3.98□□□□□ -1.77
RTR1P40084 PCL6YER059W 1263 nt3.98□□□□□ -1.77
RTR1P40084 tQ(UUG)BtQ(UUG)B 72 nt3.98□□□□□ -1.77
RTR1P40084 MAK16YAL025C 921 nt3.98□□□□□ -1.77
RTR1P40084 RSA3YLR221C 663 nt3.98□□□□□ -1.77
RTR1P40084 YBL029WYBL029W 1131 nt3.98□□□□□ -1.77
RTR1P40084 TAF8YML114C 1533 nt3.98□□□□□ -1.77
RTR1P40084 tF(GAA)DtF(GAA)D 73 nt3.97□□□□□ -1.77
RTR1P40084 tF(GAA)NtF(GAA)N 73 nt3.97□□□□□ -1.77
RTR1P40084 MIG3YER028C 1185 nt3.97□□□□□ -1.77
RTR1P40084 PUG1YER185W 912 nt3.97□□□□□ -1.77
RTR1P40084 YNL143CYNL143C 393 nt3.97□□□□□ -1.77
RTR1P40084 GCD1YOR260W 1737 nt3.97□□□□□ -1.77
RTR1P40084 CDC40YDR364C 1368 nt3.97□□□□□ -1.77
RTR1P40084 STE23YLR389C 3084 nt3.96□□□□□ -1.77
RTR1P40084 TRM1YDR120C 1713 nt3.96□□□□□ -1.78
RTR1P40084 YCL075WYCL075W 441 nt3.96□□□□□ -1.78
RTR1P40084 YEL009C-AYEL009C-A 408 nt3.96□□□□□ -1.78
RTR1P40084 SPO73YER046W 432 nt3.96□□□□□ -1.78
RTR1P40084 ERG2YMR202W 669 nt3.96□□□□□ -1.78
RTR1P40084 RPL18AYOL120C 561 nt3.96□□□□□ -1.78
RTR1P40084 YGK3YOL128C 1128 nt3.96□□□□□ -1.78
RTR1P40084 ALG5YPL227C 1005 nt3.96□□□□□ -1.78
RTR1P40084 BMT2YBR141C 1014 nt3.96□□□□□ -1.78
RTR1P40084 UBP5YER144C 2418 nt3.96□□□□□ -1.78
RTR1P40084 GRS2YPR081C 1857 nt3.96□□□□□ -1.78
RTR1P40084 ARO1YDR127W 4767 nt3.96□□□□□ -1.78
RTR1P40084 IOC4YMR044W 1428 nt3.95□□□□□ -1.78
RTR1P40084 TFB2YPL122C 1542 nt3.95□□□□□ -1.78
RTR1P40084 ALO1YML086C 1581 nt3.95□□□□□ -1.78
RTR1P40084 AIM22YJL046W 1230 nt3.95□□□□□ -1.78
RTR1P40084 YLR428CYLR428C 345 nt3.95□□□□□ -1.78
RTR1P40084 RNA1YMR235C 1224 nt3.95□□□□□ -1.78
RTR1P40084 NCE103YNL036W 666 nt3.95□□□□□ -1.78
RTR1P40084 MDJ2YNL328C 441 nt3.95□□□□□ -1.78
RTR1P40084 YPS6YIR039C 1614 nt3.95□□□□□ -1.78
RTR1P40084 GCN1YGL195W 8019 nt3.95□□□□□ -1.78
RTR1P40084 SIP1YDR422C 2448 nt3.94□□□□□ -1.78
RTR1P40084 GAS2YLR343W 1668 nt3.94□□□□□ -1.78
RTR1P40084 TGL3YMR313C 1929 nt3.94□□□□□ -1.78
RTR1P40084 YGR017WYGR017W 894 nt3.94□□□□□ -1.78
RTR1P40084 YMR316C-AYMR316C-A 312 nt3.94□□□□□ -1.78
RTR1P40084 EMC1YCL045C 2283 nt3.94□□□□□ -1.78
RTR1P40084 ALG11YNL048W 1647 nt3.94□□□□□ -1.78
RTR1P40084 NGL3YML118W 1518 nt3.94□□□□□ -1.78
RTR1P40084 FLO5YHR211W 3228 nt3.94□□□□□ -1.78
RTR1P40084 ALE1YOR175C 1860 nt3.94□□□□□ -1.78
RTR1P40084 VAC17YCL063W 1272 nt3.93□□□□□ -1.78
RTR1P40084 MRPS35YGR165W 1038 nt3.93□□□□□ -1.78
RTR1P40084 SDO1YLR022C 753 nt3.93□□□□□ -1.78
RTR1P40084 OCA1YNL099C 717 nt3.93□□□□□ -1.78
RTR1P40084 YSF3YNL138W-A 258 nt3.93□□□□□ -1.78
RTR1P40084 FDH2YPL275W 711 nt3.93□□□□□ -1.78
RTR1P40084 CHO2YGR157W 2610 nt3.93□□□□□ -1.78
RTR1P40084 PBS2YJL128C 2007 nt3.92□□□□□ -1.78
RTR1P40084 YLR345WYLR345W 1530 nt3.92□□□□□ -1.78
RTR1P40084 YGR027W-BYGR027W-B 5268 nt3.92□□□□□ -1.78
RTR1P40084 YLR227W-BYLR227W-B 5268 nt3.92□□□□□ -1.78
RTR1P40084 YPR158C-DYPR158C-D 5268 nt3.92□□□□□ -1.78
RTR1P40084 ROK1YGL171W 1695 nt3.92□□□□□ -1.78
RTR1P40084 DIN7YDR263C 1293 nt3.92□□□□□ -1.78
RTR1P40084 DOG2YHR043C 741 nt3.92□□□□□ -1.78
RTR1P40084 ISA2YPR067W 558 nt3.92□□□□□ -1.78
RTR1P40084 YBR103C-AYBR103C-A 144 nt3.92□□□□□ -1.78
RTR1P40084 MCD4YKL165C 2760 nt3.92□□□□□ -1.78
RTR1P40084 GLO3YER122C 1482 nt3.92□□□□□ -1.78
RTR1P40084 KRI1YNL308C 1776 nt3.91□□□□□ -1.78
RTR1P40084 GPB1YOR371C 2694 nt3.91□□□□□ -1.78
RTR1P40084 MIH1YMR036C 1665 nt3.91□□□□□ -1.78
RTR1P40084 APA2YDR530C 978 nt3.91□□□□□ -1.78
RTR1P40084 YGL262WYGL262W 528 nt3.91□□□□□ -1.78
RTR1P40084 YGR107WYGR107W 450 nt3.91□□□□□ -1.78
RTR1P40084 IES3YLR052W 753 nt3.91□□□□□ -1.78
RTR1P40084 TIM12YBR091C 330 nt3.91□□□□□ -1.78
RTR1P40084 CMD1YBR109C 444 nt3.91□□□□□ -1.78
RTR1P40084 BSD2YBR290W 966 nt3.91□□□□□ -1.78
RTR1P40084 SEG1YMR086W 2883 nt3.91□□□□□ -1.78
RTR1P40084 GEM1YAL048C 1989 nt3.91□□□□□ -1.78
RTR1P40084 RKM3YBR030W 1659 nt3.9□□□□□ -1.78
RTR1P40084 EPL1YFL024C 2499 nt3.9□□□□□ -1.78
RTR1P40084 GPI10YGL142C 1851 nt3.9□□□□□ -1.78
RTR1P40084 VPS45YGL095C 1734 nt3.9□□□□□ -1.78
RTR1P40084 SKP2YNL311C 2292 nt3.9□□□□□ -1.79
RTR1P40084 YJR037WYJR037W 384 nt3.9□□□□□ -1.79
Retrieved 100 of 7,029 protein–RNA pairs in 16.4 ms