Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PTPN6P29350 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.66■□□□□ 0.9
PTPN6P29350 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
PTPN6P29350 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PTPN6P29350 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PTPN6P29350 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.66■□□□□ 0.9
PTPN6P29350 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPN6P29350 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PTPN6P29350 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.66■□□□□ 0.9
PTPN6P29350 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPN6P29350 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPN6P29350 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PTPN6P29350 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTPN6P29350 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.65■□□□□ 0.9
PTPN6P29350 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.65■□□□□ 0.9
PTPN6P29350 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTPN6P29350 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
PTPN6P29350 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTPN6P29350 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.65■□□□□ 0.9
PTPN6P29350 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTPN6P29350 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC20.65■□□□□ 0.9
PTPN6P29350 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PTPN6P29350 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.65■□□□□ 0.9
PTPN6P29350 AC026310.3-201ENST00000625186 2373 ntBASIC20.65■□□□□ 0.9
PTPN6P29350 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PTPN6P29350 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.65■□□□□ 0.9
PTPN6P29350 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.64■□□□□ 0.9
PTPN6P29350 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.64■□□□□ 0.9
PTPN6P29350 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.64■□□□□ 0.9
PTPN6P29350 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PTPN6P29350 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PTPN6P29350 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PTPN6P29350 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTPN6P29350 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.64■□□□□ 0.89
PTPN6P29350 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTPN6P29350 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.64■□□□□ 0.89
PTPN6P29350 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTPN6P29350 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PTPN6P29350 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.64■□□□□ 0.89
PTPN6P29350 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
PTPN6P29350 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN6P29350 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
PTPN6P29350 FAM99A-202ENST00000538190 1989 ntBASIC20.63■□□□□ 0.89
PTPN6P29350 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN6P29350 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.63■□□□□ 0.89
PTPN6P29350 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC20.63■□□□□ 0.89
PTPN6P29350 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC20.63■□□□□ 0.89
PTPN6P29350 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.63■□□□□ 0.89
PTPN6P29350 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN6P29350 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN6P29350 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN6P29350 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN6P29350 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.63■□□□□ 0.89
PTPN6P29350 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PTPN6P29350 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN6P29350 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PTPN6P29350 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN6P29350 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN6P29350 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN6P29350 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.62■□□□□ 0.89
PTPN6P29350 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN6P29350 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
PTPN6P29350 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.62■□□□□ 0.89
PTPN6P29350 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN6P29350 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PTPN6P29350 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
PTPN6P29350 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN6P29350 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PTPN6P29350 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.62■□□□□ 0.89
PTPN6P29350 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.62■□□□□ 0.89
PTPN6P29350 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN6P29350 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN6P29350 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.61■□□□□ 0.89
PTPN6P29350 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN6P29350 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN6P29350 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN6P29350 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN6P29350 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC20.61■□□□□ 0.89
PTPN6P29350 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
PTPN6P29350 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.61■□□□□ 0.89
PTPN6P29350 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
PTPN6P29350 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
PTPN6P29350 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.61■□□□□ 0.89
PTPN6P29350 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTPN6P29350 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PTPN6P29350 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.6■□□□□ 0.89
PTPN6P29350 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.6■□□□□ 0.89
PTPN6P29350 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.6■□□□□ 0.89
PTPN6P29350 SRD5A1P1-201ENST00000442297 786 ntBASIC20.6■□□□□ 0.89
PTPN6P29350 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.6■□□□□ 0.89
PTPN6P29350 AL499627.2-201ENST00000606283 725 ntBASIC20.6■□□□□ 0.89
PTPN6P29350 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
PTPN6P29350 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN6P29350 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
PTPN6P29350 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.59■□□□□ 0.89
PTPN6P29350 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.59■□□□□ 0.89
PTPN6P29350 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.59■□□□□ 0.89
PTPN6P29350 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PTPN6P29350 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC20.59■□□□□ 0.89
PTPN6P29350 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms