Protein–RNA interactions for Protein: P11047

LAMC1, Laminin subunit gamma-1, humanhuman

Predictions only

Length 1,609 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMC1P11047 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC31.1■■■□□ 2.57
LAMC1P11047 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC31.1■■■□□ 2.57
LAMC1P11047 AC137761.2-201ENST00000561729 223 ntBASIC31.1■■■□□ 2.57
LAMC1P11047 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC31.1■■■□□ 2.57
LAMC1P11047 AC145350.3-201ENST00000569033 163 ntBASIC31.1■■■□□ 2.57
LAMC1P11047 AP004607.4-201ENST00000530158 1459 ntBASIC31.1■■■□□ 2.57
LAMC1P11047 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC31.1■■■□□ 2.57
LAMC1P11047 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
LAMC1P11047 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
LAMC1P11047 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC31.09■■■□□ 2.57
LAMC1P11047 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
LAMC1P11047 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
LAMC1P11047 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
LAMC1P11047 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC31.09■■■□□ 2.57
LAMC1P11047 HSCB-202ENST00000398941 955 ntTSL 2 BASIC31.09■■■□□ 2.57
LAMC1P11047 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC31.09■■■□□ 2.57
LAMC1P11047 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC31.09■■■□□ 2.57
LAMC1P11047 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
LAMC1P11047 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC31.08■■■□□ 2.57
LAMC1P11047 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC31.08■■■□□ 2.57
LAMC1P11047 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
LAMC1P11047 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
LAMC1P11047 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC31.08■■■□□ 2.57
LAMC1P11047 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC31.08■■■□□ 2.57
LAMC1P11047 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
LAMC1P11047 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC31.08■■■□□ 2.57
LAMC1P11047 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC31.08■■■□□ 2.57
LAMC1P11047 CPT2-209ENST00000636935 803 ntTSL 5 BASIC31.08■■■□□ 2.57
LAMC1P11047 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
LAMC1P11047 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
LAMC1P11047 COX20-201ENST00000366528 568 ntTSL 2 BASIC31.07■■■□□ 2.56
LAMC1P11047 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
LAMC1P11047 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC31.07■■■□□ 2.56
LAMC1P11047 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC31.07■■■□□ 2.56
LAMC1P11047 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
LAMC1P11047 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC31.07■■■□□ 2.56
LAMC1P11047 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC31.07■■■□□ 2.56
LAMC1P11047 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC31.06■■■□□ 2.56
LAMC1P11047 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
LAMC1P11047 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
LAMC1P11047 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
LAMC1P11047 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
LAMC1P11047 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC31.06■■■□□ 2.56
LAMC1P11047 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC31.06■■■□□ 2.56
LAMC1P11047 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
LAMC1P11047 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
LAMC1P11047 STX7-201ENST00000367937 1090 ntTSL 5 BASIC31.06■■■□□ 2.56
LAMC1P11047 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
LAMC1P11047 PPP1R14BP3-201ENST00000509033 445 ntBASIC31.06■■■□□ 2.56
LAMC1P11047 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC31.05■■■□□ 2.56
LAMC1P11047 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
LAMC1P11047 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
LAMC1P11047 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC31.05■■■□□ 2.56
LAMC1P11047 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
LAMC1P11047 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC31.05■■■□□ 2.56
LAMC1P11047 AC026185.1-201ENST00000445748 174 ntBASIC31.05■■■□□ 2.56
LAMC1P11047 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
LAMC1P11047 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC31.04■■■□□ 2.56
LAMC1P11047 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
LAMC1P11047 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
LAMC1P11047 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
LAMC1P11047 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
LAMC1P11047 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC31.04■■■□□ 2.56
LAMC1P11047 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC31.04■■■□□ 2.56
LAMC1P11047 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC31.04■■■□□ 2.56
LAMC1P11047 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC31.04■■■□□ 2.56
LAMC1P11047 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
LAMC1P11047 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
LAMC1P11047 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
LAMC1P11047 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
LAMC1P11047 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
LAMC1P11047 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC31.03■■■□□ 2.56
LAMC1P11047 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
LAMC1P11047 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
LAMC1P11047 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC31.03■■■□□ 2.56
LAMC1P11047 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC31.03■■■□□ 2.56
LAMC1P11047 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC31.03■■■□□ 2.56
LAMC1P11047 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC31.03■■■□□ 2.56
LAMC1P11047 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC31.02■■■□□ 2.56
LAMC1P11047 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC31.02■■■□□ 2.56
LAMC1P11047 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC31.02■■■□□ 2.56
LAMC1P11047 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
LAMC1P11047 CROCCP5-201ENST00000436658 830 ntBASIC31.02■■■□□ 2.56
LAMC1P11047 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC31.02■■■□□ 2.56
LAMC1P11047 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC31.02■■■□□ 2.56
LAMC1P11047 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC31.02■■■□□ 2.56
LAMC1P11047 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC31.02■■■□□ 2.56
LAMC1P11047 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
LAMC1P11047 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
LAMC1P11047 DUSP8P5-201ENST00000422884 1815 ntBASIC31.01■■■□□ 2.56
LAMC1P11047 LINC01960-201ENST00000563759 1884 ntBASIC31.01■■■□□ 2.56
LAMC1P11047 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC31.01■■■□□ 2.56
LAMC1P11047 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC31■■■□□ 2.55
LAMC1P11047 GCA-201ENST00000233612 1694 ntTSL 2 BASIC31■■■□□ 2.55
LAMC1P11047 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC31■■■□□ 2.55
LAMC1P11047 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC31■■■□□ 2.55
LAMC1P11047 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC31■■■□□ 2.55
LAMC1P11047 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC31■■■□□ 2.55
LAMC1P11047 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC31■■■□□ 2.55
LAMC1P11047 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms