Protein–RNA interactions for Protein: P0CH09

RPL40B, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40BP0CH09 ENT3YJR125C 1227 nt3.07□□□□□ -1.92
RPL40BP0CH09 SLD7YOR060C 774 nt3.07□□□□□ -1.92
RPL40BP0CH09 MRM1YOR201C 1239 nt3.07□□□□□ -1.92
RPL40BP0CH09 SCP1YOR367W 603 nt3.07□□□□□ -1.92
RPL40BP0CH09 COA2YPL189C-A 207 nt3.07□□□□□ -1.92
RPL40BP0CH09 RRP5YMR229C 5190 nt3.06□□□□□ -1.92
RPL40BP0CH09 OPT2YPR194C 2634 nt3.06□□□□□ -1.92
RPL40BP0CH09 RAD54YGL163C 2697 nt3.06□□□□□ -1.92
RPL40BP0CH09 SLN1YIL147C 3663 nt3.06□□□□□ -1.92
RPL40BP0CH09 PUG1YER185W 912 nt3.06□□□□□ -1.92
RPL40BP0CH09 YHR214C-EYHR214C-E 300 nt3.06□□□□□ -1.92
RPL40BP0CH09 CCT7YJL111W 1653 nt3.06□□□□□ -1.92
RPL40BP0CH09 KDX1YKL161C 1302 nt3.06□□□□□ -1.92
RPL40BP0CH09 PAM18YLR008C 507 nt3.06□□□□□ -1.92
RPL40BP0CH09 VTA1YLR181C 993 nt3.06□□□□□ -1.92
RPL40BP0CH09 YAR070CYAR070C 300 nt3.06□□□□□ -1.92
RPL40BP0CH09 MFM1YPL060W 1242 nt3.06□□□□□ -1.92
RPL40BP0CH09 SCD6YPR129W 1050 nt3.06□□□□□ -1.92
RPL40BP0CH09 ABD1YBR236C 1311 nt3.06□□□□□ -1.92
RPL40BP0CH09 YEL025CYEL025C 3567 nt3.05□□□□□ -1.92
RPL40BP0CH09 IXR1YKL032C 1794 nt3.05□□□□□ -1.92
RPL40BP0CH09 SLM5YCR024C 1479 nt3.05□□□□□ -1.92
RPL40BP0CH09 SPO73YER046W 432 nt3.05□□□□□ -1.92
RPL40BP0CH09 YLR257WYLR257W 966 nt3.05□□□□□ -1.92
RPL40BP0CH09 YPT53YNL093W 663 nt3.05□□□□□ -1.92
RPL40BP0CH09 TIP20YGL145W 2106 nt3.05□□□□□ -1.92
RPL40BP0CH09 SAT4YCR008W 1812 nt3.05□□□□□ -1.92
RPL40BP0CH09 BAR1YIL015W 1764 nt3.05□□□□□ -1.92
RPL40BP0CH09 TYW1YPL207W 2433 nt3.04□□□□□ -1.92
RPL40BP0CH09 STE11YLR362W 2154 nt3.04□□□□□ -1.92
RPL40BP0CH09 ECO1YFR027W 846 nt3.04□□□□□ -1.92
RPL40BP0CH09 YAL031W-AYAL031W-A 309 nt3.04□□□□□ -1.92
RPL40BP0CH09 GIS2YNL255C 462 nt3.04□□□□□ -1.92
RPL40BP0CH09 CUS2YNL286W 858 nt3.04□□□□□ -1.92
RPL40BP0CH09 AUS1YOR011W 4185 nt3.04□□□□□ -1.92
RPL40BP0CH09 BOI2YER114C 3123 nt3.03□□□□□ -1.92
RPL40BP0CH09 YOR296WYOR296W 3870 nt3.03□□□□□ -1.92
RPL40BP0CH09 SPR28YDR218C 1272 nt3.03□□□□□ -1.92
RPL40BP0CH09 LPP1YDR503C 825 nt3.03□□□□□ -1.92
RPL40BP0CH09 SAE3YHR079C-A 276 nt3.03□□□□□ -1.92
RPL40BP0CH09 REV7YIL139C 738 nt3.03□□□□□ -1.92
RPL40BP0CH09 AIM22YJL046W 1230 nt3.03□□□□□ -1.92
RPL40BP0CH09 CYC1YJR048W 330 nt3.03□□□□□ -1.92
RPL40BP0CH09 MIT1YEL007W 2001 nt3.03□□□□□ -1.92
RPL40BP0CH09 TGL3YMR313C 1929 nt3.03□□□□□ -1.92
RPL40BP0CH09 FRE8YLR047C 2061 nt3.02□□□□□ -1.93
RPL40BP0CH09 DIT1YDR403W 1611 nt3.02□□□□□ -1.93
RPL40BP0CH09 PPH3YDR075W 927 nt3.02□□□□□ -1.93
RPL40BP0CH09 USE1YGL098W 738 nt3.02□□□□□ -1.93
RPL40BP0CH09 MYO3YKL129C 3819 nt3.02□□□□□ -1.93
RPL40BP0CH09 YMR087WYMR087W 855 nt3.02□□□□□ -1.93
RPL40BP0CH09 YNL165WYNL165W 1221 nt3.02□□□□□ -1.93
RPL40BP0CH09 IDI1YPL117C 867 nt3.02□□□□□ -1.93
RPL40BP0CH09 NTO1YPR031W 2247 nt3.02□□□□□ -1.93
RPL40BP0CH09 HEF3YNL014W 3135 nt3.02□□□□□ -1.93
RPL40BP0CH09 YIL082W-AYIL082W-A 4497 nt3.02□□□□□ -1.93
RPL40BP0CH09 CHA4YLR098C 1947 nt3.01□□□□□ -1.93
RPL40BP0CH09 KRE5YOR336W 4098 nt3.01□□□□□ -1.93
RPL40BP0CH09 GEP4YHR100C 558 nt3.01□□□□□ -1.93
RPL40BP0CH09 YHR214C-DYHR214C-D 294 nt3.01□□□□□ -1.93
RPL40BP0CH09 YAR069CYAR069C 294 nt3.01□□□□□ -1.93
RPL40BP0CH09 ECM2YBR065C 1095 nt3.01□□□□□ -1.93
RPL40BP0CH09 DNA2YHR164C 4569 nt3.01□□□□□ -1.93
RPL40BP0CH09 THR4YCR053W 1545 nt3□□□□□ -1.93
RPL40BP0CH09 YME2YMR302C 2553 nt3□□□□□ -1.93
RPL40BP0CH09 RSM24YDR175C 960 nt3□□□□□ -1.93
RPL40BP0CH09 PAN5YHR063C 1140 nt3□□□□□ -1.93
RPL40BP0CH09 CBT1YKL208W 816 nt3□□□□□ -1.93
RPL40BP0CH09 RPS21AYKR057W 264 nt3□□□□□ -1.93
RPL40BP0CH09 SWC7YLR385C 399 nt3□□□□□ -1.93
RPL40BP0CH09 YBL039W-BYBL039W-B 180 nt3□□□□□ -1.93
RPL40BP0CH09 YOR034C-AYOR034C-A 243 nt3□□□□□ -1.93
RPL40BP0CH09 MMR1YLR190W 1476 nt3□□□□□ -1.93
RPL40BP0CH09 FMP30YPL103C 1407 nt3□□□□□ -1.93
RPL40BP0CH09 GCN1YGL195W 8019 nt2.99□□□□□ -1.93
RPL40BP0CH09 UBP6YFR010W 1500 nt2.99□□□□□ -1.93
RPL40BP0CH09 NOP4YPL043W 2058 nt2.99□□□□□ -1.93
RPL40BP0CH09 MCD4YKL165C 2760 nt2.99□□□□□ -1.93
RPL40BP0CH09 TRP4YDR354W 1143 nt2.99□□□□□ -1.93
RPL40BP0CH09 MIG3YER028C 1185 nt2.99□□□□□ -1.93
RPL40BP0CH09 YLL017WYLL017W 312 nt2.99□□□□□ -1.93
RPL40BP0CH09 MSN1YOL116W 1149 nt2.99□□□□□ -1.93
RPL40BP0CH09 DGK1YOR311C 873 nt2.99□□□□□ -1.93
RPL40BP0CH09 IML2YJL082W 2196 nt2.99□□□□□ -1.93
RPL40BP0CH09 YAK1YJL141C 2424 nt2.99□□□□□ -1.93
RPL40BP0CH09 DEG1YFL001W 1329 nt2.98□□□□□ -1.93
RPL40BP0CH09 YFL040WYFL040W 1623 nt2.98□□□□□ -1.93
RPL40BP0CH09 SEG1YMR086W 2883 nt2.98□□□□□ -1.93
RPL40BP0CH09 PSF1YDR013W 627 nt2.98□□□□□ -1.93
RPL40BP0CH09 YGL188CYGL188C 174 nt2.98□□□□□ -1.93
RPL40BP0CH09 INN1YNL152W 1230 nt2.98□□□□□ -1.93
RPL40BP0CH09 TIR2YOR010C 756 nt2.98□□□□□ -1.93
RPL40BP0CH09 YTH1YPR107C 627 nt2.98□□□□□ -1.93
RPL40BP0CH09 FLO9YAL063C 3969 nt2.98□□□□□ -1.93
RPL40BP0CH09 ATG23YLR431C 1362 nt2.98□□□□□ -1.93
RPL40BP0CH09 HPR1YDR138W 2259 nt2.98□□□□□ -1.93
RPL40BP0CH09 APP1YNL094W 1764 nt2.97□□□□□ -1.93
RPL40BP0CH09 FKH1YIL131C 1455 nt2.97□□□□□ -1.93
RPL40BP0CH09 APM4YOL062C 1476 nt2.97□□□□□ -1.93
RPL40BP0CH09 EMC1YCL045C 2283 nt2.97□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 18 ms