Protein–RNA interactions for Protein: P0CH08

RPL40A, Ubiquitin-60S ribosomal protein L40, yeastyeast

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPL40AP0CH08 ENT3YJR125C 1227 nt3.07□□□□□ -1.92
RPL40AP0CH08 SLD7YOR060C 774 nt3.07□□□□□ -1.92
RPL40AP0CH08 MRM1YOR201C 1239 nt3.07□□□□□ -1.92
RPL40AP0CH08 SCP1YOR367W 603 nt3.07□□□□□ -1.92
RPL40AP0CH08 COA2YPL189C-A 207 nt3.07□□□□□ -1.92
RPL40AP0CH08 RRP5YMR229C 5190 nt3.06□□□□□ -1.92
RPL40AP0CH08 OPT2YPR194C 2634 nt3.06□□□□□ -1.92
RPL40AP0CH08 RAD54YGL163C 2697 nt3.06□□□□□ -1.92
RPL40AP0CH08 SLN1YIL147C 3663 nt3.06□□□□□ -1.92
RPL40AP0CH08 PUG1YER185W 912 nt3.06□□□□□ -1.92
RPL40AP0CH08 YHR214C-EYHR214C-E 300 nt3.06□□□□□ -1.92
RPL40AP0CH08 CCT7YJL111W 1653 nt3.06□□□□□ -1.92
RPL40AP0CH08 KDX1YKL161C 1302 nt3.06□□□□□ -1.92
RPL40AP0CH08 PAM18YLR008C 507 nt3.06□□□□□ -1.92
RPL40AP0CH08 VTA1YLR181C 993 nt3.06□□□□□ -1.92
RPL40AP0CH08 YAR070CYAR070C 300 nt3.06□□□□□ -1.92
RPL40AP0CH08 MFM1YPL060W 1242 nt3.06□□□□□ -1.92
RPL40AP0CH08 SCD6YPR129W 1050 nt3.06□□□□□ -1.92
RPL40AP0CH08 ABD1YBR236C 1311 nt3.06□□□□□ -1.92
RPL40AP0CH08 YEL025CYEL025C 3567 nt3.05□□□□□ -1.92
RPL40AP0CH08 IXR1YKL032C 1794 nt3.05□□□□□ -1.92
RPL40AP0CH08 SLM5YCR024C 1479 nt3.05□□□□□ -1.92
RPL40AP0CH08 SPO73YER046W 432 nt3.05□□□□□ -1.92
RPL40AP0CH08 YLR257WYLR257W 966 nt3.05□□□□□ -1.92
RPL40AP0CH08 YPT53YNL093W 663 nt3.05□□□□□ -1.92
RPL40AP0CH08 TIP20YGL145W 2106 nt3.05□□□□□ -1.92
RPL40AP0CH08 SAT4YCR008W 1812 nt3.05□□□□□ -1.92
RPL40AP0CH08 BAR1YIL015W 1764 nt3.05□□□□□ -1.92
RPL40AP0CH08 TYW1YPL207W 2433 nt3.04□□□□□ -1.92
RPL40AP0CH08 STE11YLR362W 2154 nt3.04□□□□□ -1.92
RPL40AP0CH08 ECO1YFR027W 846 nt3.04□□□□□ -1.92
RPL40AP0CH08 YAL031W-AYAL031W-A 309 nt3.04□□□□□ -1.92
RPL40AP0CH08 GIS2YNL255C 462 nt3.04□□□□□ -1.92
RPL40AP0CH08 CUS2YNL286W 858 nt3.04□□□□□ -1.92
RPL40AP0CH08 AUS1YOR011W 4185 nt3.04□□□□□ -1.92
RPL40AP0CH08 BOI2YER114C 3123 nt3.03□□□□□ -1.92
RPL40AP0CH08 YOR296WYOR296W 3870 nt3.03□□□□□ -1.92
RPL40AP0CH08 SPR28YDR218C 1272 nt3.03□□□□□ -1.92
RPL40AP0CH08 LPP1YDR503C 825 nt3.03□□□□□ -1.92
RPL40AP0CH08 SAE3YHR079C-A 276 nt3.03□□□□□ -1.92
RPL40AP0CH08 REV7YIL139C 738 nt3.03□□□□□ -1.92
RPL40AP0CH08 AIM22YJL046W 1230 nt3.03□□□□□ -1.92
RPL40AP0CH08 CYC1YJR048W 330 nt3.03□□□□□ -1.92
RPL40AP0CH08 MIT1YEL007W 2001 nt3.03□□□□□ -1.92
RPL40AP0CH08 TGL3YMR313C 1929 nt3.03□□□□□ -1.92
RPL40AP0CH08 FRE8YLR047C 2061 nt3.02□□□□□ -1.93
RPL40AP0CH08 DIT1YDR403W 1611 nt3.02□□□□□ -1.93
RPL40AP0CH08 PPH3YDR075W 927 nt3.02□□□□□ -1.93
RPL40AP0CH08 USE1YGL098W 738 nt3.02□□□□□ -1.93
RPL40AP0CH08 MYO3YKL129C 3819 nt3.02□□□□□ -1.93
RPL40AP0CH08 YMR087WYMR087W 855 nt3.02□□□□□ -1.93
RPL40AP0CH08 YNL165WYNL165W 1221 nt3.02□□□□□ -1.93
RPL40AP0CH08 IDI1YPL117C 867 nt3.02□□□□□ -1.93
RPL40AP0CH08 NTO1YPR031W 2247 nt3.02□□□□□ -1.93
RPL40AP0CH08 HEF3YNL014W 3135 nt3.02□□□□□ -1.93
RPL40AP0CH08 YIL082W-AYIL082W-A 4497 nt3.02□□□□□ -1.93
RPL40AP0CH08 CHA4YLR098C 1947 nt3.01□□□□□ -1.93
RPL40AP0CH08 KRE5YOR336W 4098 nt3.01□□□□□ -1.93
RPL40AP0CH08 GEP4YHR100C 558 nt3.01□□□□□ -1.93
RPL40AP0CH08 YHR214C-DYHR214C-D 294 nt3.01□□□□□ -1.93
RPL40AP0CH08 YAR069CYAR069C 294 nt3.01□□□□□ -1.93
RPL40AP0CH08 ECM2YBR065C 1095 nt3.01□□□□□ -1.93
RPL40AP0CH08 DNA2YHR164C 4569 nt3.01□□□□□ -1.93
RPL40AP0CH08 THR4YCR053W 1545 nt3□□□□□ -1.93
RPL40AP0CH08 YME2YMR302C 2553 nt3□□□□□ -1.93
RPL40AP0CH08 RSM24YDR175C 960 nt3□□□□□ -1.93
RPL40AP0CH08 PAN5YHR063C 1140 nt3□□□□□ -1.93
RPL40AP0CH08 CBT1YKL208W 816 nt3□□□□□ -1.93
RPL40AP0CH08 RPS21AYKR057W 264 nt3□□□□□ -1.93
RPL40AP0CH08 SWC7YLR385C 399 nt3□□□□□ -1.93
RPL40AP0CH08 YBL039W-BYBL039W-B 180 nt3□□□□□ -1.93
RPL40AP0CH08 YOR034C-AYOR034C-A 243 nt3□□□□□ -1.93
RPL40AP0CH08 MMR1YLR190W 1476 nt3□□□□□ -1.93
RPL40AP0CH08 FMP30YPL103C 1407 nt3□□□□□ -1.93
RPL40AP0CH08 GCN1YGL195W 8019 nt2.99□□□□□ -1.93
RPL40AP0CH08 UBP6YFR010W 1500 nt2.99□□□□□ -1.93
RPL40AP0CH08 NOP4YPL043W 2058 nt2.99□□□□□ -1.93
RPL40AP0CH08 MCD4YKL165C 2760 nt2.99□□□□□ -1.93
RPL40AP0CH08 TRP4YDR354W 1143 nt2.99□□□□□ -1.93
RPL40AP0CH08 MIG3YER028C 1185 nt2.99□□□□□ -1.93
RPL40AP0CH08 YLL017WYLL017W 312 nt2.99□□□□□ -1.93
RPL40AP0CH08 MSN1YOL116W 1149 nt2.99□□□□□ -1.93
RPL40AP0CH08 DGK1YOR311C 873 nt2.99□□□□□ -1.93
RPL40AP0CH08 IML2YJL082W 2196 nt2.99□□□□□ -1.93
RPL40AP0CH08 YAK1YJL141C 2424 nt2.99□□□□□ -1.93
RPL40AP0CH08 DEG1YFL001W 1329 nt2.98□□□□□ -1.93
RPL40AP0CH08 YFL040WYFL040W 1623 nt2.98□□□□□ -1.93
RPL40AP0CH08 SEG1YMR086W 2883 nt2.98□□□□□ -1.93
RPL40AP0CH08 PSF1YDR013W 627 nt2.98□□□□□ -1.93
RPL40AP0CH08 YGL188CYGL188C 174 nt2.98□□□□□ -1.93
RPL40AP0CH08 INN1YNL152W 1230 nt2.98□□□□□ -1.93
RPL40AP0CH08 TIR2YOR010C 756 nt2.98□□□□□ -1.93
RPL40AP0CH08 YTH1YPR107C 627 nt2.98□□□□□ -1.93
RPL40AP0CH08 FLO9YAL063C 3969 nt2.98□□□□□ -1.93
RPL40AP0CH08 ATG23YLR431C 1362 nt2.98□□□□□ -1.93
RPL40AP0CH08 HPR1YDR138W 2259 nt2.98□□□□□ -1.93
RPL40AP0CH08 APP1YNL094W 1764 nt2.97□□□□□ -1.93
RPL40AP0CH08 FKH1YIL131C 1455 nt2.97□□□□□ -1.93
RPL40AP0CH08 APM4YOL062C 1476 nt2.97□□□□□ -1.93
RPL40AP0CH08 EMC1YCL045C 2283 nt2.97□□□□□ -1.93
Retrieved 100 of 7,029 protein–RNA pairs in 19 ms