Protein–RNA interactions for Protein: P0C0X0

RPS28B, 40S ribosomal protein S28-B, yeastyeast

Known RBP Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPS28BP0C0X0 tV(CAC)DtV(CAC)D 73 nt2.58□□□□□ -2
RPS28BP0C0X0 tV(CAC)HtV(CAC)H 73 nt2.58□□□□□ -2
RPS28BP0C0X0 YJL175WYJL175W 513 nt2.58□□□□□ -2
RPS28BP0C0X0 YLR154W-BYLR154W-B 165 nt2.58□□□□□ -2
RPS28BP0C0X0 CAF40YNL288W 1122 nt2.58□□□□□ -2
RPS28BP0C0X0 BUD21YOR078W 645 nt2.58□□□□□ -2
RPS28BP0C0X0 SRB8YCR081W 4284 nt2.58□□□□□ -2
RPS28BP0C0X0 SWC4YGR002C 1431 nt2.58□□□□□ -2
RPS28BP0C0X0 MAL12YGR292W 1755 nt2.57□□□□□ -2
RPS28BP0C0X0 MAL32YBR299W 1755 nt2.57□□□□□ -2
RPS28BP0C0X0 YDR340WYDR340W 303 nt2.57□□□□□ -2
RPS28BP0C0X0 TOS8YGL096W 831 nt2.57□□□□□ -2
RPS28BP0C0X0 MRT4YKL009W 711 nt2.57□□□□□ -2
RPS28BP0C0X0 LDB7YBL006C 543 nt2.57□□□□□ -2
RPS28BP0C0X0 YNL181WYNL181W 1224 nt2.57□□□□□ -2
RPS28BP0C0X0 YOR343CYOR343C 327 nt2.57□□□□□ -2
RPS28BP0C0X0 UBC4YBR082C 447 nt2.57□□□□□ -2
RPS28BP0C0X0 YPL109CYPL109C 1974 nt2.57□□□□□ -2
RPS28BP0C0X0 APM1YPL259C 1428 nt2.57□□□□□ -2
RPS28BP0C0X0 POL31YJR006W 1464 nt2.57□□□□□ -2
RPS28BP0C0X0 MGR3YMR115W 1506 nt2.57□□□□□ -2
RPS28BP0C0X0 YBR138CYBR138C 1575 nt2.57□□□□□ -2
RPS28BP0C0X0 MTL1YGR023W 1656 nt2.57□□□□□ -2
RPS28BP0C0X0 NCR1YPL006W 3513 nt2.56□□□□□ -2
RPS28BP0C0X0 ERP3YDL018C 678 nt2.56□□□□□ -2
RPS28BP0C0X0 IWR1YDL115C 1062 nt2.56□□□□□ -2
RPS28BP0C0X0 DOS2YDR068W 933 nt2.56□□□□□ -2
RPS28BP0C0X0 YDR161WYDR161W 1164 nt2.56□□□□□ -2
RPS28BP0C0X0 NAG1YGR031C-A 492 nt2.56□□□□□ -2
RPS28BP0C0X0 YGR161W-CYGR161W-C 279 nt2.56□□□□□ -2
RPS28BP0C0X0 DAL2YIR029W 1032 nt2.56□□□□□ -2
RPS28BP0C0X0 KAE1YKR038C 1161 nt2.56□□□□□ -2
RPS28BP0C0X0 YOR338WYOR338W 1092 nt2.56□□□□□ -2
RPS28BP0C0X0 EBS1YDR206W 2655 nt2.56□□□□□ -2
RPS28BP0C0X0 MRS2YOR334W 1413 nt2.56□□□□□ -2
RPS28BP0C0X0 YFL040WYFL040W 1623 nt2.56□□□□□ -2
RPS28BP0C0X0 MIP6YHR015W 1980 nt2.56□□□□□ -2
RPS28BP0C0X0 GAC1YOR178C 2382 nt2.56□□□□□ -2
RPS28BP0C0X0 UTP14YML093W 2700 nt2.55□□□□□ -2
RPS28BP0C0X0 RHB1YCR027C 630 nt2.55□□□□□ -2
RPS28BP0C0X0 GRX2YDR513W 432 nt2.55□□□□□ -2
RPS28BP0C0X0 CLD1YGR110W 1338 nt2.55□□□□□ -2
RPS28BP0C0X0 YGR160WYGR160W 612 nt2.55□□□□□ -2
RPS28BP0C0X0 APS3YJL024C 585 nt2.55□□□□□ -2
RPS28BP0C0X0 YJR115WYJR115W 510 nt2.55□□□□□ -2
RPS28BP0C0X0 YLR194CYLR194C 765 nt2.55□□□□□ -2
RPS28BP0C0X0 VIP1YLR410W 3441 nt2.55□□□□□ -2
RPS28BP0C0X0 CCS1YMR038C 750 nt2.55□□□□□ -2
RPS28BP0C0X0 RRB1YMR131C 1536 nt2.55□□□□□ -2
RPS28BP0C0X0 DIA2YOR080W 2199 nt2.55□□□□□ -2
RPS28BP0C0X0 AFT2YPL202C 1251 nt2.55□□□□□ -2
RPS28BP0C0X0 MED1YPR070W 1701 nt2.55□□□□□ -2
RPS28BP0C0X0 YIL092WYIL092W 1902 nt2.54□□□□□ -2
RPS28BP0C0X0 SDS23YGL056C 1584 nt2.54□□□□□ -2
RPS28BP0C0X0 PSY2YNL201C 2577 nt2.54□□□□□ -2
RPS28BP0C0X0 YDR034W-BYDR034W-B 156 nt2.54□□□□□ -2
RPS28BP0C0X0 DET1YDR051C 1005 nt2.54□□□□□ -2
RPS28BP0C0X0 AI5_BETAQ0075 1065 nt2.54□□□□□ -2
RPS28BP0C0X0 YGL082WYGL082W 1146 nt2.54□□□□□ -2
RPS28BP0C0X0 MIC26YGR235C 702 nt2.54□□□□□ -2
RPS28BP0C0X0 EFG1YGR271C-A 702 nt2.54□□□□□ -2
RPS28BP0C0X0 RNH1YMR234W 1047 nt2.54□□□□□ -2
RPS28BP0C0X0 MPD2YOL088C 834 nt2.54□□□□□ -2
RPS28BP0C0X0 ARA1YBR149W 1035 nt2.54□□□□□ -2
RPS28BP0C0X0 HFM1YGL251C 3564 nt2.54□□□□□ -2
RPS28BP0C0X0 MEF1YLR069C 2286 nt2.54□□□□□ -2
RPS28BP0C0X0 CTM1YHR109W 1758 nt2.54□□□□□ -2
RPS28BP0C0X0 HSP30YCR021C 999 nt2.53□□□□□ -2
RPS28BP0C0X0 MRPL11YDL202W 750 nt2.53□□□□□ -2
RPS28BP0C0X0 FIN1YDR130C 876 nt2.53□□□□□ -2
RPS28BP0C0X0 YGR026WYGR026W 837 nt2.53□□□□□ -2
RPS28BP0C0X0 BCD1YHR040W 1101 nt2.53□□□□□ -2
RPS28BP0C0X0 RPS11BYBR048W 471 nt2.53□□□□□ -2
RPS28BP0C0X0 CTK1YKL139W 1587 nt2.53□□□□□ -2.01
RPS28BP0C0X0 SEC59YMR013C 1560 nt2.53□□□□□ -2.01
RPS28BP0C0X0 ADY4YLR227C 1482 nt2.52□□□□□ -2.01
RPS28BP0C0X0 GEA1YJR031C 4227 nt2.52□□□□□ -2.01
RPS28BP0C0X0 ASI1YMR119W 1875 nt2.52□□□□□ -2.01
RPS28BP0C0X0 TRX3YCR083W 384 nt2.52□□□□□ -2.01
RPS28BP0C0X0 YDR209CYDR209C 414 nt2.52□□□□□ -2.01
RPS28BP0C0X0 AHA1YDR214W 1053 nt2.52□□□□□ -2.01
RPS28BP0C0X0 YGL074CYGL074C 327 nt2.52□□□□□ -2.01
RPS28BP0C0X0 AML1YGR001C 747 nt2.52□□□□□ -2.01
RPS28BP0C0X0 YHR086W-AYHR086W-A 162 nt2.52□□□□□ -2.01
RPS28BP0C0X0 CPR7YJR032W 1182 nt2.52□□□□□ -2.01
RPS28BP0C0X0 YAL044W-AYAL044W-A 333 nt2.52□□□□□ -2.01
RPS28BP0C0X0 PRE7YBL041W 726 nt2.52□□□□□ -2.01
RPS28BP0C0X0 YBL077WYBL077W 432 nt2.52□□□□□ -2.01
RPS28BP0C0X0 INO4YOL108C 456 nt2.52□□□□□ -2.01
RPS28BP0C0X0 PFY1YOR122C 381 nt2.52□□□□□ -2.01
RPS28BP0C0X0 PNT1YOR266W 1272 nt2.52□□□□□ -2.01
RPS28BP0C0X0 RIX1YHR197W 2292 nt2.52□□□□□ -2.01
RPS28BP0C0X0 SPO77YLR341W 1434 nt2.51□□□□□ -2.01
RPS28BP0C0X0 YDL176WYDL176W 2127 nt2.51□□□□□ -2.01
RPS28BP0C0X0 THP1YOL072W 1368 nt2.51□□□□□ -2.01
RPS28BP0C0X0 YDR246W-AYDR246W-A 201 nt2.51□□□□□ -2.01
RPS28BP0C0X0 THO1YER063W 657 nt2.51□□□□□ -2.01
RPS28BP0C0X0 SRP102YKL154W 735 nt2.51□□□□□ -2.01
RPS28BP0C0X0 YLR111WYLR111W 333 nt2.51□□□□□ -2.01
RPS28BP0C0X0 INP1YMR204C 1263 nt2.51□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 79.2 ms