Protein–RNA interactions for Protein: P07858

CTSB, Cathepsin B, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSBP07858 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CTSBP07858 AC123595.1-201ENST00000440769 1046 ntBASIC20.73■□□□□ 0.91
CTSBP07858 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.73■□□□□ 0.91
CTSBP07858 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.73■□□□□ 0.91
CTSBP07858 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CTSBP07858 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CTSBP07858 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CTSBP07858 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTSBP07858 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CTSBP07858 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTSBP07858 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTSBP07858 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTSBP07858 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTSBP07858 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
CTSBP07858 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CTSBP07858 AC092666.2-201ENST00000613287 246 ntBASIC20.72■□□□□ 0.91
CTSBP07858 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTSBP07858 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTSBP07858 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTSBP07858 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CTSBP07858 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CTSBP07858 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CTSBP07858 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTSBP07858 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTSBP07858 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.71■□□□□ 0.91
CTSBP07858 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTSBP07858 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTSBP07858 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTSBP07858 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.71■□□□□ 0.91
CTSBP07858 TERF1P2-201ENST00000583350 1212 ntBASIC20.71■□□□□ 0.91
CTSBP07858 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTSBP07858 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.71■□□□□ 0.91
CTSBP07858 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC20.71■□□□□ 0.91
CTSBP07858 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTSBP07858 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CTSBP07858 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CTSBP07858 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CTSBP07858 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.7■□□□□ 0.9
CTSBP07858 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTSBP07858 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTSBP07858 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTSBP07858 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CTSBP07858 MFF-208ENST00000409616 1247 ntTSL 5 BASIC20.7■□□□□ 0.9
CTSBP07858 AC034268.1-201ENST00000441047 882 ntBASIC20.7■□□□□ 0.9
CTSBP07858 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.7■□□□□ 0.9
CTSBP07858 TPRG1LP1-201ENST00000598702 760 ntBASIC20.7■□□□□ 0.9
CTSBP07858 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CTSBP07858 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CTSBP07858 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTSBP07858 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.69■□□□□ 0.9
CTSBP07858 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CTSBP07858 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CTSBP07858 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CTSBP07858 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CTSBP07858 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.69■□□□□ 0.9
CTSBP07858 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CTSBP07858 KRT18P5-201ENST00000436075 1291 ntBASIC20.69■□□□□ 0.9
CTSBP07858 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.69■□□□□ 0.9
CTSBP07858 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
CTSBP07858 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CTSBP07858 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
CTSBP07858 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTSBP07858 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTSBP07858 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTSBP07858 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTSBP07858 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTSBP07858 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.68■□□□□ 0.9
CTSBP07858 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CTSBP07858 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC20.68■□□□□ 0.9
CTSBP07858 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.68■□□□□ 0.9
CTSBP07858 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CTSBP07858 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CTSBP07858 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CTSBP07858 KRT18P14-201ENST00000534205 1250 ntBASIC20.68■□□□□ 0.9
CTSBP07858 KRT18P61-201ENST00000585825 1298 ntBASIC20.68■□□□□ 0.9
CTSBP07858 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTSBP07858 LINC02228-203ENST00000641970 1355 ntBASIC20.68■□□□□ 0.9
CTSBP07858 BX005040.4-201ENST00000637145 1518 ntBASIC20.68■□□□□ 0.9
CTSBP07858 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CTSBP07858 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CTSBP07858 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTSBP07858 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.67■□□□□ 0.9
CTSBP07858 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
CTSBP07858 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTSBP07858 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTSBP07858 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTSBP07858 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.67■□□□□ 0.9
CTSBP07858 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CTSBP07858 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.67■□□□□ 0.9
CTSBP07858 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.67■□□□□ 0.9
CTSBP07858 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.67■□□□□ 0.9
CTSBP07858 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTSBP07858 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.67■□□□□ 0.9
CTSBP07858 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CTSBP07858 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC20.66■□□□□ 0.9
CTSBP07858 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTSBP07858 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTSBP07858 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTSBP07858 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CTSBP07858 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms