Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
HMGN1P05114 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGN1P05114 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGN1P05114 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.65■□□□□ 0.74
HMGN1P05114 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGN1P05114 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
HMGN1P05114 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGN1P05114 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGN1P05114 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGN1P05114 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.65■□□□□ 0.74
HMGN1P05114 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.65■□□□□ 0.74
HMGN1P05114 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.65■□□□□ 0.74
HMGN1P05114 AC009102.2-201ENST00000606772 1639 ntBASIC19.65■□□□□ 0.74
HMGN1P05114 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGN1P05114 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGN1P05114 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
HMGN1P05114 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
HMGN1P05114 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC19.65■□□□□ 0.74
HMGN1P05114 AC244015.2-201ENST00000616358 1861 ntBASIC19.65■□□□□ 0.74
HMGN1P05114 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
HMGN1P05114 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.64■□□□□ 0.74
HMGN1P05114 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC19.64■□□□□ 0.74
HMGN1P05114 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.64■□□□□ 0.73
HMGN1P05114 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HMGN1P05114 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMGN1P05114 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.64■□□□□ 0.73
HMGN1P05114 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.64■□□□□ 0.73
HMGN1P05114 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.64■□□□□ 0.73
HMGN1P05114 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.64■□□□□ 0.73
HMGN1P05114 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.64■□□□□ 0.73
HMGN1P05114 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
HMGN1P05114 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMGN1P05114 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
HMGN1P05114 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC19.64■□□□□ 0.73
HMGN1P05114 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMGN1P05114 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMGN1P05114 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMGN1P05114 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
HMGN1P05114 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
HMGN1P05114 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
HMGN1P05114 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
HMGN1P05114 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.63■□□□□ 0.73
HMGN1P05114 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HMGN1P05114 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGN1P05114 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
HMGN1P05114 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HMGN1P05114 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.63■□□□□ 0.73
HMGN1P05114 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
HMGN1P05114 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.63■□□□□ 0.73
HMGN1P05114 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.63■□□□□ 0.73
HMGN1P05114 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.63■□□□□ 0.73
HMGN1P05114 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HMGN1P05114 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGN1P05114 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
HMGN1P05114 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
HMGN1P05114 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.63■□□□□ 0.73
HMGN1P05114 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMGN1P05114 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HMGN1P05114 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
HMGN1P05114 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMGN1P05114 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMGN1P05114 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMGN1P05114 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMGN1P05114 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.62■□□□□ 0.73
HMGN1P05114 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
HMGN1P05114 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
HMGN1P05114 AC092028.1-203ENST00000608262 953 ntBASIC19.62■□□□□ 0.73
HMGN1P05114 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
HMGN1P05114 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.62■□□□□ 0.73
HMGN1P05114 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
HMGN1P05114 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.62■□□□□ 0.73
HMGN1P05114 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
HMGN1P05114 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMGN1P05114 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMGN1P05114 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.61■□□□□ 0.73
HMGN1P05114 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.61■□□□□ 0.73
HMGN1P05114 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
HMGN1P05114 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMGN1P05114 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMGN1P05114 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
HMGN1P05114 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMGN1P05114 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HMGN1P05114 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.61■□□□□ 0.73
HMGN1P05114 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMGN1P05114 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
HMGN1P05114 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
HMGN1P05114 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
HMGN1P05114 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.61■□□□□ 0.73
HMGN1P05114 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HMGN1P05114 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.6■□□□□ 0.73
HMGN1P05114 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGN1P05114 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGN1P05114 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGN1P05114 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HMGN1P05114 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGN1P05114 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
HMGN1P05114 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
HMGN1P05114 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
HMGN1P05114 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
HMGN1P05114 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms