Protein–RNA interactions for Protein: O76009

KRT33A, Keratin, type I cuticular Ha3-I, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT33AO76009 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
KRT33AO76009 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT33AO76009 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
KRT33AO76009 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT33AO76009 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT33AO76009 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.63■□□□□ 0.73
KRT33AO76009 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT33AO76009 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT33AO76009 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.63■□□□□ 0.73
KRT33AO76009 MIR3181-201ENST00000578512 73 ntBASIC19.63■□□□□ 0.73
KRT33AO76009 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
KRT33AO76009 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.63■□□□□ 0.73
KRT33AO76009 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
KRT33AO76009 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT33AO76009 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT33AO76009 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.62■□□□□ 0.73
KRT33AO76009 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KRT33AO76009 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT33AO76009 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT33AO76009 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
KRT33AO76009 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
KRT33AO76009 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT33AO76009 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
KRT33AO76009 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
KRT33AO76009 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.62■□□□□ 0.73
KRT33AO76009 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT33AO76009 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT33AO76009 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT33AO76009 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
KRT33AO76009 SERBP1P1-201ENST00000396021 1160 ntBASIC19.62■□□□□ 0.73
KRT33AO76009 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.62■□□□□ 0.73
KRT33AO76009 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
KRT33AO76009 AL138724.1-201ENST00000606771 1088 ntBASIC19.62■□□□□ 0.73
KRT33AO76009 AL136162.1-201ENST00000607711 1078 ntBASIC19.62■□□□□ 0.73
KRT33AO76009 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT33AO76009 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT33AO76009 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT33AO76009 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
KRT33AO76009 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.62■□□□□ 0.73
KRT33AO76009 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
KRT33AO76009 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT33AO76009 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
KRT33AO76009 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT33AO76009 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT33AO76009 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
KRT33AO76009 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.61■□□□□ 0.73
KRT33AO76009 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT33AO76009 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
KRT33AO76009 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.61■□□□□ 0.73
KRT33AO76009 PBX2P1-201ENST00000493219 1291 ntBASIC19.61■□□□□ 0.73
KRT33AO76009 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KRT33AO76009 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.61■□□□□ 0.73
KRT33AO76009 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.61■□□□□ 0.73
KRT33AO76009 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KRT33AO76009 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KRT33AO76009 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
KRT33AO76009 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
KRT33AO76009 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT33AO76009 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT33AO76009 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.6■□□□□ 0.73
KRT33AO76009 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KRT33AO76009 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT33AO76009 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT33AO76009 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
KRT33AO76009 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT33AO76009 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT33AO76009 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.6■□□□□ 0.73
KRT33AO76009 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT33AO76009 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.6■□□□□ 0.73
KRT33AO76009 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC19.6■□□□□ 0.73
KRT33AO76009 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT33AO76009 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
KRT33AO76009 AC133637.1-201ENST00000624115 1537 ntBASIC19.6■□□□□ 0.73
KRT33AO76009 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.6■□□□□ 0.73
KRT33AO76009 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC19.59■□□□□ 0.73
KRT33AO76009 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.59■□□□□ 0.73
KRT33AO76009 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.59■□□□□ 0.73
KRT33AO76009 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT33AO76009 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KRT33AO76009 AC135279.3-201ENST00000610945 1311 ntBASIC19.59■□□□□ 0.73
KRT33AO76009 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.59■□□□□ 0.73
KRT33AO76009 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.59■□□□□ 0.73
KRT33AO76009 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
KRT33AO76009 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.59■□□□□ 0.73
KRT33AO76009 AL499627.2-201ENST00000606283 725 ntBASIC19.59■□□□□ 0.73
KRT33AO76009 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.59■□□□□ 0.73
KRT33AO76009 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
KRT33AO76009 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT33AO76009 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
KRT33AO76009 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
KRT33AO76009 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
KRT33AO76009 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
KRT33AO76009 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC19.58■□□□□ 0.72
KRT33AO76009 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
KRT33AO76009 AC011298.3-201ENST00000615796 283 ntBASIC19.58■□□□□ 0.72
KRT33AO76009 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
KRT33AO76009 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
KRT33AO76009 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
KRT33AO76009 AC004687.1-201ENST00000579003 1625 ntBASIC19.58■□□□□ 0.72
KRT33AO76009 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms