Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
TRIM3O75382 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
TRIM3O75382 AC105265.2-201ENST00000467189 838 ntBASIC20.2■□□□□ 0.82
TRIM3O75382 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TRIM3O75382 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.2■□□□□ 0.82
TRIM3O75382 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.2■□□□□ 0.82
TRIM3O75382 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TRIM3O75382 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM3O75382 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM3O75382 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.2■□□□□ 0.82
TRIM3O75382 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.19■□□□□ 0.82
TRIM3O75382 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM3O75382 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.19■□□□□ 0.82
TRIM3O75382 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM3O75382 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM3O75382 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.19■□□□□ 0.82
TRIM3O75382 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM3O75382 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM3O75382 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM3O75382 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM3O75382 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
TRIM3O75382 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM3O75382 GUK1-205ENST00000366722 850 ntTSL 3 BASIC20.18■□□□□ 0.82
TRIM3O75382 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TRIM3O75382 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM3O75382 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
TRIM3O75382 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM3O75382 AC127496.7-201ENST00000625110 1798 ntBASIC20.18■□□□□ 0.82
TRIM3O75382 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM3O75382 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.18■□□□□ 0.82
TRIM3O75382 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM3O75382 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
TRIM3O75382 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
TRIM3O75382 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM3O75382 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.17■□□□□ 0.82
TRIM3O75382 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
TRIM3O75382 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
TRIM3O75382 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM3O75382 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM3O75382 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
TRIM3O75382 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM3O75382 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TRIM3O75382 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.17■□□□□ 0.82
TRIM3O75382 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.17■□□□□ 0.82
TRIM3O75382 AC010525.1-201ENST00000585559 441 ntBASIC20.17■□□□□ 0.82
TRIM3O75382 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM3O75382 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM3O75382 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.17■□□□□ 0.82
TRIM3O75382 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM3O75382 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TRIM3O75382 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.17■□□□□ 0.82
TRIM3O75382 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM3O75382 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM3O75382 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM3O75382 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM3O75382 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM3O75382 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
TRIM3O75382 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM3O75382 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM3O75382 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.16■□□□□ 0.82
TRIM3O75382 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM3O75382 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.16■□□□□ 0.82
TRIM3O75382 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC20.16■□□□□ 0.82
TRIM3O75382 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM3O75382 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM3O75382 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
TRIM3O75382 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM3O75382 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM3O75382 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM3O75382 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
TRIM3O75382 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.16■□□□□ 0.82
TRIM3O75382 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.16■□□□□ 0.82
TRIM3O75382 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRIM3O75382 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM3O75382 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM3O75382 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.15■□□□□ 0.82
TRIM3O75382 AC126544.1-201ENST00000580842 1059 ntBASIC20.15■□□□□ 0.82
TRIM3O75382 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.15■□□□□ 0.82
TRIM3O75382 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM3O75382 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM3O75382 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM3O75382 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRIM3O75382 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.14■□□□□ 0.81
TRIM3O75382 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.14■□□□□ 0.81
TRIM3O75382 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM3O75382 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM3O75382 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.14■□□□□ 0.81
TRIM3O75382 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM3O75382 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.14■□□□□ 0.81
TRIM3O75382 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.14■□□□□ 0.81
TRIM3O75382 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
TRIM3O75382 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.14■□□□□ 0.81
TRIM3O75382 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM3O75382 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
TRIM3O75382 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM3O75382 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRIM3O75382 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.14■□□□□ 0.81
TRIM3O75382 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.14■□□□□ 0.81
TRIM3O75382 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRIM3O75382 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms