Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC18.68■□□□□ 0.58
PHF1O43189 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHF1O43189 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHF1O43189 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHF1O43189 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHF1O43189 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
PHF1O43189 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHF1O43189 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHF1O43189 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHF1O43189 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHF1O43189 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.67■□□□□ 0.58
PHF1O43189 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PHF1O43189 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PHF1O43189 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
PHF1O43189 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHF1O43189 ID1-201ENST00000376105 1233 ntBASIC18.67■□□□□ 0.58
PHF1O43189 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
PHF1O43189 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PHF1O43189 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.67■□□□□ 0.58
PHF1O43189 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHF1O43189 AC009086.3-201ENST00000623486 1008 ntBASIC18.67■□□□□ 0.58
PHF1O43189 AC241377.3-202ENST00000626088 1088 ntBASIC18.67■□□□□ 0.58
PHF1O43189 AC241585.3-202ENST00000628937 1088 ntBASIC18.67■□□□□ 0.58
PHF1O43189 AC245100.8-202ENST00000629247 1058 ntBASIC18.67■□□□□ 0.58
PHF1O43189 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.67■□□□□ 0.58
PHF1O43189 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHF1O43189 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHF1O43189 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC18.67■□□□□ 0.58
PHF1O43189 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHF1O43189 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
PHF1O43189 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PHF1O43189 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHF1O43189 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
PHF1O43189 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHF1O43189 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHF1O43189 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PHF1O43189 AC034268.1-201ENST00000441047 882 ntBASIC18.66■□□□□ 0.58
PHF1O43189 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.66■□□□□ 0.58
PHF1O43189 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHF1O43189 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHF1O43189 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.66■□□□□ 0.58
PHF1O43189 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHF1O43189 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHF1O43189 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHF1O43189 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PHF1O43189 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PHF1O43189 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHF1O43189 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHF1O43189 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PHF1O43189 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PHF1O43189 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.65■□□□□ 0.58
PHF1O43189 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHF1O43189 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PHF1O43189 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PHF1O43189 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.65■□□□□ 0.58
PHF1O43189 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.65■□□□□ 0.58
PHF1O43189 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.65■□□□□ 0.58
PHF1O43189 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PHF1O43189 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PHF1O43189 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
PHF1O43189 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
PHF1O43189 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PHF1O43189 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHF1O43189 COMT-203ENST00000403184 2217 ntTSL 2 BASIC18.64■□□□□ 0.57
PHF1O43189 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PHF1O43189 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PHF1O43189 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHF1O43189 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.64■□□□□ 0.57
PHF1O43189 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.64■□□□□ 0.57
PHF1O43189 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.64■□□□□ 0.57
PHF1O43189 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.64■□□□□ 0.57
PHF1O43189 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.64■□□□□ 0.57
PHF1O43189 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PHF1O43189 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
PHF1O43189 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PHF1O43189 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.64■□□□□ 0.57
PHF1O43189 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
PHF1O43189 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PHF1O43189 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC18.63■□□□□ 0.57
PHF1O43189 SLC47A1P1-202ENST00000449666 945 ntBASIC18.63■□□□□ 0.57
PHF1O43189 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.63■□□□□ 0.57
PHF1O43189 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.63■□□□□ 0.57
PHF1O43189 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHF1O43189 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
PHF1O43189 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
PHF1O43189 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.63■□□□□ 0.57
PHF1O43189 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.63■□□□□ 0.57
PHF1O43189 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHF1O43189 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PHF1O43189 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PHF1O43189 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHF1O43189 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PHF1O43189 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHF1O43189 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHF1O43189 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHF1O43189 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHF1O43189 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
PHF1O43189 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC18.62■□□□□ 0.57
PHF1O43189 AC099791.1-201ENST00000416440 715 ntBASIC18.62■□□□□ 0.57
PHF1O43189 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms