Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 BX276092.2-201ENST00000417668 665 ntBASIC23.55■■□□□ 1.36
SOX1O00570 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC23.55■■□□□ 1.36
SOX1O00570 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
SOX1O00570 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
SOX1O00570 INO80E-214ENST00000620599 515 ntTSL 2 BASIC23.55■■□□□ 1.36
SOX1O00570 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
SOX1O00570 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
SOX1O00570 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC23.54■■□□□ 1.36
SOX1O00570 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC23.54■■□□□ 1.36
SOX1O00570 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC23.54■■□□□ 1.36
SOX1O00570 AL445228.2-201ENST00000605589 952 ntBASIC23.54■■□□□ 1.36
SOX1O00570 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC23.54■■□□□ 1.36
SOX1O00570 ASL-203ENST00000380839 1765 ntTSL 5 BASIC23.54■■□□□ 1.36
SOX1O00570 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
SOX1O00570 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.54■■□□□ 1.36
SOX1O00570 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
SOX1O00570 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC23.54■■□□□ 1.36
SOX1O00570 AL161729.1-201ENST00000604104 1402 ntBASIC23.53■■□□□ 1.36
SOX1O00570 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SOX1O00570 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
SOX1O00570 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
SOX1O00570 BET1L-204ENST00000410108 637 ntTSL 3 BASIC23.53■■□□□ 1.36
SOX1O00570 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC23.53■■□□□ 1.36
SOX1O00570 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC23.53■■□□□ 1.36
SOX1O00570 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SOX1O00570 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.53■■□□□ 1.36
SOX1O00570 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
SOX1O00570 AC010501.1-201ENST00000606270 1962 ntBASIC23.52■■□□□ 1.36
SOX1O00570 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SOX1O00570 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC23.52■■□□□ 1.36
SOX1O00570 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SOX1O00570 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC23.52■■□□□ 1.36
SOX1O00570 Z99916.2-201ENST00000604037 246 ntBASIC23.52■■□□□ 1.36
SOX1O00570 AC016405.3-201ENST00000607710 860 ntBASIC23.52■■□□□ 1.36
SOX1O00570 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SOX1O00570 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC23.52■■□□□ 1.36
SOX1O00570 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
SOX1O00570 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
SOX1O00570 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
SOX1O00570 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SOX1O00570 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.51■■□□□ 1.35
SOX1O00570 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SOX1O00570 BMP1-204ENST00000397814 836 ntTSL 4 BASIC23.51■■□□□ 1.35
SOX1O00570 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC23.51■■□□□ 1.35
SOX1O00570 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC23.51■■□□□ 1.35
SOX1O00570 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC23.51■■□□□ 1.35
SOX1O00570 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SOX1O00570 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC23.51■■□□□ 1.35
SOX1O00570 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC23.51■■□□□ 1.35
SOX1O00570 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC23.51■■□□□ 1.35
SOX1O00570 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
SOX1O00570 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
SOX1O00570 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SOX1O00570 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC23.5■■□□□ 1.35
SOX1O00570 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC23.5■■□□□ 1.35
SOX1O00570 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
SOX1O00570 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
SOX1O00570 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC23.5■■□□□ 1.35
SOX1O00570 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC23.5■■□□□ 1.35
SOX1O00570 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
SOX1O00570 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC23.5■■□□□ 1.35
SOX1O00570 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
SOX1O00570 AC013268.1-206ENST00000638368 961 ntBASIC23.5■■□□□ 1.35
SOX1O00570 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC23.5■■□□□ 1.35
SOX1O00570 AC112229.1-201ENST00000639295 961 ntBASIC23.5■■□□□ 1.35
SOX1O00570 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SOX1O00570 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC23.5■■□□□ 1.35
SOX1O00570 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
SOX1O00570 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
SOX1O00570 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SOX1O00570 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SOX1O00570 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
SOX1O00570 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
SOX1O00570 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.49■■□□□ 1.35
SOX1O00570 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.49■■□□□ 1.35
SOX1O00570 AC005224.4-201ENST00000583262 1652 ntBASIC23.49■■□□□ 1.35
SOX1O00570 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SOX1O00570 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC23.49■■□□□ 1.35
SOX1O00570 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC23.49■■□□□ 1.35
SOX1O00570 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
SOX1O00570 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC23.49■■□□□ 1.35
SOX1O00570 AC091874.3-201ENST00000512672 1195 ntBASIC23.49■■□□□ 1.35
SOX1O00570 AP003097.1-201ENST00000530657 1135 ntBASIC23.49■■□□□ 1.35
SOX1O00570 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC23.49■■□□□ 1.35
SOX1O00570 OR10C1-204ENST00000622521 1039 ntBASIC23.49■■□□□ 1.35
SOX1O00570 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.49■■□□□ 1.35
SOX1O00570 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SOX1O00570 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
SOX1O00570 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SOX1O00570 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
SOX1O00570 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC23.48■■□□□ 1.35
SOX1O00570 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.48■■□□□ 1.35
SOX1O00570 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.48■■□□□ 1.35
SOX1O00570 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.48■■□□□ 1.35
SOX1O00570 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
SOX1O00570 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
SOX1O00570 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SOX1O00570 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
SOX1O00570 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
SOX1O00570 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms