Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC28.18■■■□□ 2.1
CHL1O00533 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CHL1O00533 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CHL1O00533 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC28.17■■■□□ 2.1
CHL1O00533 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC28.17■■■□□ 2.1
CHL1O00533 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC28.17■■■□□ 2.1
CHL1O00533 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CHL1O00533 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
CHL1O00533 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
CHL1O00533 LINC00526-201ENST00000581067 1875 ntBASIC28.17■■■□□ 2.1
CHL1O00533 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC28.16■■■□□ 2.1
CHL1O00533 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
CHL1O00533 AC034268.1-201ENST00000441047 882 ntBASIC28.16■■■□□ 2.1
CHL1O00533 AL162430.1-201ENST00000480705 870 ntBASIC28.16■■■□□ 2.1
CHL1O00533 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC28.16■■■□□ 2.1
CHL1O00533 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC28.16■■■□□ 2.1
CHL1O00533 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC28.16■■■□□ 2.1
CHL1O00533 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CHL1O00533 ASL-203ENST00000380839 1765 ntTSL 5 BASIC28.16■■■□□ 2.1
CHL1O00533 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
CHL1O00533 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
CHL1O00533 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC28.15■■■□□ 2.1
CHL1O00533 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
CHL1O00533 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
CHL1O00533 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC28.15■■■□□ 2.1
CHL1O00533 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CHL1O00533 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
CHL1O00533 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
CHL1O00533 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.1
CHL1O00533 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CHL1O00533 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CHL1O00533 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC28.14■■■□□ 2.1
CHL1O00533 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC28.14■■■□□ 2.1
CHL1O00533 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
CHL1O00533 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CHL1O00533 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
CHL1O00533 C1orf229-201ENST00000623686 2258 ntBASIC28.14■■■□□ 2.1
CHL1O00533 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CHL1O00533 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
CHL1O00533 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC28.13■■■□□ 2.09
CHL1O00533 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC28.13■■■□□ 2.09
CHL1O00533 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
CHL1O00533 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC28.13■■■□□ 2.09
CHL1O00533 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC28.13■■■□□ 2.09
CHL1O00533 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CHL1O00533 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
CHL1O00533 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CHL1O00533 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC28.12■■■□□ 2.09
CHL1O00533 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC28.12■■■□□ 2.09
CHL1O00533 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC28.12■■■□□ 2.09
CHL1O00533 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC28.12■■■□□ 2.09
CHL1O00533 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC28.12■■■□□ 2.09
CHL1O00533 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CHL1O00533 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
CHL1O00533 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CHL1O00533 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
CHL1O00533 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
CHL1O00533 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC28.11■■■□□ 2.09
CHL1O00533 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC28.11■■■□□ 2.09
CHL1O00533 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC28.11■■■□□ 2.09
CHL1O00533 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC28.11■■■□□ 2.09
CHL1O00533 KRT18P14-201ENST00000534205 1250 ntBASIC28.11■■■□□ 2.09
CHL1O00533 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC28.11■■■□□ 2.09
CHL1O00533 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC28.11■■■□□ 2.09
CHL1O00533 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CHL1O00533 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CHL1O00533 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
CHL1O00533 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC28.1■■■□□ 2.09
CHL1O00533 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC28.1■■■□□ 2.09
CHL1O00533 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC28.1■■■□□ 2.09
CHL1O00533 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CHL1O00533 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CHL1O00533 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CHL1O00533 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC28.1■■■□□ 2.09
CHL1O00533 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
CHL1O00533 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC28.1■■■□□ 2.09
CHL1O00533 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC28.1■■■□□ 2.09
CHL1O00533 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
CHL1O00533 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CHL1O00533 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC28.09■■■□□ 2.09
CHL1O00533 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
CHL1O00533 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC28.09■■■□□ 2.09
CHL1O00533 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CHL1O00533 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC28.09■■■□□ 2.09
CHL1O00533 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC28.09■■■□□ 2.09
CHL1O00533 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
CHL1O00533 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
CHL1O00533 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC28.09■■■□□ 2.09
CHL1O00533 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC28.08■■■□□ 2.09
CHL1O00533 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CHL1O00533 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC28.08■■■□□ 2.09
CHL1O00533 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CHL1O00533 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC28.08■■■□□ 2.09
CHL1O00533 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
CHL1O00533 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC28.08■■■□□ 2.09
CHL1O00533 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CHL1O00533 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CHL1O00533 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
CHL1O00533 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
CHL1O00533 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC28.07■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms