Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CACNB4O00305 KRT18P14-201ENST00000534205 1250 ntBASIC21.53■■□□□ 1.04
CACNB4O00305 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.53■■□□□ 1.04
CACNB4O00305 SMUG1P1-201ENST00000590640 811 ntBASIC21.53■■□□□ 1.04
CACNB4O00305 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CACNB4O00305 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CACNB4O00305 BX005040.4-201ENST00000637145 1518 ntBASIC21.53■■□□□ 1.04
CACNB4O00305 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CACNB4O00305 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CACNB4O00305 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC21.53■■□□□ 1.04
CACNB4O00305 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CACNB4O00305 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CACNB4O00305 DUSP8P5-201ENST00000422884 1815 ntBASIC21.52■■□□□ 1.04
CACNB4O00305 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CACNB4O00305 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CACNB4O00305 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CACNB4O00305 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CACNB4O00305 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CACNB4O00305 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CACNB4O00305 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.52■■□□□ 1.04
CACNB4O00305 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CACNB4O00305 TERF1P2-201ENST00000583350 1212 ntBASIC21.52■■□□□ 1.04
CACNB4O00305 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC21.52■■□□□ 1.04
CACNB4O00305 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CACNB4O00305 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CACNB4O00305 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CACNB4O00305 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.52■■□□□ 1.03
CACNB4O00305 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.03
CACNB4O00305 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CACNB4O00305 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CACNB4O00305 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CACNB4O00305 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CACNB4O00305 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
CACNB4O00305 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC21.51■■□□□ 1.03
CACNB4O00305 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CACNB4O00305 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC21.51■■□□□ 1.03
CACNB4O00305 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC21.51■■□□□ 1.03
CACNB4O00305 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CACNB4O00305 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CACNB4O00305 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC21.51■■□□□ 1.03
CACNB4O00305 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CACNB4O00305 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CACNB4O00305 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CACNB4O00305 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
CACNB4O00305 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.5■■□□□ 1.03
CACNB4O00305 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CACNB4O00305 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CACNB4O00305 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CACNB4O00305 KRT18P5-201ENST00000436075 1291 ntBASIC21.5■■□□□ 1.03
CACNB4O00305 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CACNB4O00305 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC21.5■■□□□ 1.03
CACNB4O00305 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21.5■■□□□ 1.03
CACNB4O00305 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
CACNB4O00305 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CACNB4O00305 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CACNB4O00305 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
CACNB4O00305 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CACNB4O00305 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CACNB4O00305 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CACNB4O00305 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CACNB4O00305 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CACNB4O00305 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC21.49■■□□□ 1.03
CACNB4O00305 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC21.49■■□□□ 1.03
CACNB4O00305 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC21.49■■□□□ 1.03
CACNB4O00305 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CACNB4O00305 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.49■■□□□ 1.03
CACNB4O00305 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CACNB4O00305 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.48■■□□□ 1.03
CACNB4O00305 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CACNB4O00305 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.48■■□□□ 1.03
CACNB4O00305 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CACNB4O00305 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC21.48■■□□□ 1.03
CACNB4O00305 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
CACNB4O00305 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CACNB4O00305 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC21.48■■□□□ 1.03
CACNB4O00305 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
CACNB4O00305 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
CACNB4O00305 TPRG1LP1-201ENST00000598702 760 ntBASIC21.48■■□□□ 1.03
CACNB4O00305 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
CACNB4O00305 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CACNB4O00305 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.48■■□□□ 1.03
CACNB4O00305 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CACNB4O00305 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CACNB4O00305 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CACNB4O00305 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CACNB4O00305 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CACNB4O00305 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.47■■□□□ 1.03
CACNB4O00305 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CACNB4O00305 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CACNB4O00305 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CACNB4O00305 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
CACNB4O00305 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.47■■□□□ 1.03
CACNB4O00305 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CACNB4O00305 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CACNB4O00305 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CACNB4O00305 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC21.47■■□□□ 1.03
CACNB4O00305 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CACNB4O00305 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
CACNB4O00305 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CACNB4O00305 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms