Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.62■■□□□ 1.21
CCDC188H7C350 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCDC188H7C350 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.62■■□□□ 1.21
CCDC188H7C350 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.62■■□□□ 1.21
CCDC188H7C350 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.62■■□□□ 1.21
CCDC188H7C350 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
CCDC188H7C350 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC22.62■■□□□ 1.21
CCDC188H7C350 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CCDC188H7C350 Z98882.1-201ENST00000622160 2253 ntBASIC22.61■■□□□ 1.21
CCDC188H7C350 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CCDC188H7C350 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
CCDC188H7C350 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.61■■□□□ 1.21
CCDC188H7C350 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CCDC188H7C350 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
CCDC188H7C350 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.61■■□□□ 1.21
CCDC188H7C350 AC103834.1-201ENST00000520383 144 ntBASIC22.61■■□□□ 1.21
CCDC188H7C350 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC22.61■■□□□ 1.21
CCDC188H7C350 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
CCDC188H7C350 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
CCDC188H7C350 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
CCDC188H7C350 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.61■■□□□ 1.21
CCDC188H7C350 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC22.61■■□□□ 1.21
CCDC188H7C350 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
CCDC188H7C350 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CCDC188H7C350 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.6■■□□□ 1.21
CCDC188H7C350 AC103724.3-201ENST00000564481 992 ntBASIC22.6■■□□□ 1.21
CCDC188H7C350 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.6■■□□□ 1.21
CCDC188H7C350 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
CCDC188H7C350 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
CCDC188H7C350 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC22.6■■□□□ 1.21
CCDC188H7C350 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.59■■□□□ 1.21
CCDC188H7C350 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CCDC188H7C350 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
CCDC188H7C350 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CCDC188H7C350 GUK1-208ENST00000366728 842 ntTSL 2 BASIC22.59■■□□□ 1.21
CCDC188H7C350 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.59■■□□□ 1.21
CCDC188H7C350 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
CCDC188H7C350 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
CCDC188H7C350 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC22.59■■□□□ 1.21
CCDC188H7C350 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
CCDC188H7C350 SLC25A24-204ENST00000569674 2357 ntBASIC22.58■■□□□ 1.21
CCDC188H7C350 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.58■■□□□ 1.21
CCDC188H7C350 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CCDC188H7C350 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
CCDC188H7C350 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
CCDC188H7C350 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
CCDC188H7C350 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.21
CCDC188H7C350 NKILA-201ENST00000613231 537 ntTSL 4 BASIC22.58■■□□□ 1.21
CCDC188H7C350 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
CCDC188H7C350 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC22.58■■□□□ 1.2
CCDC188H7C350 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC188H7C350 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.57■■□□□ 1.2
CCDC188H7C350 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC22.57■■□□□ 1.2
CCDC188H7C350 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC188H7C350 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
CCDC188H7C350 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
CCDC188H7C350 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC188H7C350 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC22.57■■□□□ 1.2
CCDC188H7C350 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC188H7C350 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
CCDC188H7C350 ME2-206ENST00000638410 2289 ntTSL 5 BASIC22.56■■□□□ 1.2
CCDC188H7C350 ME2-210ENST00000639255 2262 ntTSL 5 BASIC22.56■■□□□ 1.2
CCDC188H7C350 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC22.56■■□□□ 1.2
CCDC188H7C350 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CCDC188H7C350 AC021242.3-201ENST00000607598 1377 ntBASIC22.56■■□□□ 1.2
CCDC188H7C350 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC22.56■■□□□ 1.2
CCDC188H7C350 CLTA-206ENST00000466396 695 ntTSL 2 BASIC22.56■■□□□ 1.2
CCDC188H7C350 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
CCDC188H7C350 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.56■■□□□ 1.2
CCDC188H7C350 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
CCDC188H7C350 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC188H7C350 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC188H7C350 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
CCDC188H7C350 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC22.55■■□□□ 1.2
CCDC188H7C350 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC188H7C350 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC188H7C350 YBX1P4-201ENST00000392794 808 ntBASIC22.55■■□□□ 1.2
CCDC188H7C350 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
CCDC188H7C350 AC009102.2-201ENST00000606772 1639 ntBASIC22.55■■□□□ 1.2
CCDC188H7C350 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC188H7C350 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
CCDC188H7C350 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
CCDC188H7C350 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
CCDC188H7C350 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CCDC188H7C350 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
CCDC188H7C350 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC22.55■■□□□ 1.2
CCDC188H7C350 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC188H7C350 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC188H7C350 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC188H7C350 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC188H7C350 FEM1AP4-201ENST00000443167 1987 ntBASIC22.54■■□□□ 1.2
CCDC188H7C350 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC188H7C350 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC188H7C350 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC188H7C350 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC188H7C350 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CCDC188H7C350 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.54■■□□□ 1.2
CCDC188H7C350 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
CCDC188H7C350 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC22.54■■□□□ 1.2
CCDC188H7C350 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms