Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
MBD3L4A6NDZ8 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MBD3L4A6NDZ8 AC006015.1-201ENST00000429970 570 ntBASIC19.25■□□□□ 0.67
MBD3L4A6NDZ8 AC079140.4-201ENST00000507448 529 ntBASIC19.25■□□□□ 0.67
MBD3L4A6NDZ8 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.25■□□□□ 0.67
MBD3L4A6NDZ8 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC19.25■□□□□ 0.67
MBD3L4A6NDZ8 VPS53-216ENST00000574029 585 ntTSL 4 BASIC19.25■□□□□ 0.67
MBD3L4A6NDZ8 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
MBD3L4A6NDZ8 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MBD3L4A6NDZ8 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
MBD3L4A6NDZ8 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MBD3L4A6NDZ8 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MBD3L4A6NDZ8 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MBD3L4A6NDZ8 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MBD3L4A6NDZ8 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MBD3L4A6NDZ8 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MBD3L4A6NDZ8 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MBD3L4A6NDZ8 KRT19P1-201ENST00000405746 1186 ntBASIC19.24■□□□□ 0.67
MBD3L4A6NDZ8 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.24■□□□□ 0.67
MBD3L4A6NDZ8 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.24■□□□□ 0.67
MBD3L4A6NDZ8 AC079089.2-201ENST00000531211 1277 ntBASIC19.24■□□□□ 0.67
MBD3L4A6NDZ8 AC137761.2-201ENST00000561729 223 ntBASIC19.24■□□□□ 0.67
MBD3L4A6NDZ8 AC145350.3-201ENST00000569033 163 ntBASIC19.24■□□□□ 0.67
MBD3L4A6NDZ8 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
MBD3L4A6NDZ8 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
MBD3L4A6NDZ8 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MBD3L4A6NDZ8 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MBD3L4A6NDZ8 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MBD3L4A6NDZ8 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.23■□□□□ 0.67
MBD3L4A6NDZ8 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MBD3L4A6NDZ8 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
MBD3L4A6NDZ8 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
MBD3L4A6NDZ8 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MBD3L4A6NDZ8 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
MBD3L4A6NDZ8 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.22■□□□□ 0.67
MBD3L4A6NDZ8 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MBD3L4A6NDZ8 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MBD3L4A6NDZ8 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MBD3L4A6NDZ8 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
MBD3L4A6NDZ8 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.22■□□□□ 0.67
MBD3L4A6NDZ8 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.22■□□□□ 0.67
MBD3L4A6NDZ8 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.22■□□□□ 0.67
MBD3L4A6NDZ8 AC016769.1-201ENST00000409132 1010 ntBASIC19.22■□□□□ 0.67
MBD3L4A6NDZ8 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.22■□□□□ 0.67
MBD3L4A6NDZ8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
MBD3L4A6NDZ8 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.22■□□□□ 0.67
MBD3L4A6NDZ8 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
MBD3L4A6NDZ8 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.22■□□□□ 0.67
MBD3L4A6NDZ8 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.22■□□□□ 0.67
MBD3L4A6NDZ8 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
MBD3L4A6NDZ8 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
MBD3L4A6NDZ8 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.22■□□□□ 0.67
MBD3L4A6NDZ8 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.21■□□□□ 0.67
MBD3L4A6NDZ8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MBD3L4A6NDZ8 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MBD3L4A6NDZ8 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MBD3L4A6NDZ8 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.21■□□□□ 0.67
MBD3L4A6NDZ8 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.21■□□□□ 0.67
MBD3L4A6NDZ8 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.21■□□□□ 0.67
MBD3L4A6NDZ8 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.21■□□□□ 0.67
MBD3L4A6NDZ8 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.21■□□□□ 0.67
MBD3L4A6NDZ8 AC093323.1-202ENST00000635031 2045 ntBASIC19.21■□□□□ 0.67
MBD3L4A6NDZ8 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.21■□□□□ 0.67
MBD3L4A6NDZ8 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
MBD3L4A6NDZ8 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MBD3L4A6NDZ8 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MBD3L4A6NDZ8 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
MBD3L4A6NDZ8 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
MBD3L4A6NDZ8 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.2■□□□□ 0.66
MBD3L4A6NDZ8 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.2■□□□□ 0.66
MBD3L4A6NDZ8 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
MBD3L4A6NDZ8 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MBD3L4A6NDZ8 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MBD3L4A6NDZ8 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
MBD3L4A6NDZ8 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
MBD3L4A6NDZ8 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
MBD3L4A6NDZ8 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC19.2■□□□□ 0.66
MBD3L4A6NDZ8 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
MBD3L4A6NDZ8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
MBD3L4A6NDZ8 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
MBD3L4A6NDZ8 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MBD3L4A6NDZ8 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
MBD3L4A6NDZ8 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.19■□□□□ 0.66
MBD3L4A6NDZ8 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
MBD3L4A6NDZ8 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC19.19■□□□□ 0.66
MBD3L4A6NDZ8 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC19.19■□□□□ 0.66
MBD3L4A6NDZ8 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
MBD3L4A6NDZ8 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
MBD3L4A6NDZ8 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
MBD3L4A6NDZ8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
MBD3L4A6NDZ8 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.18■□□□□ 0.66
MBD3L4A6NDZ8 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC19.18■□□□□ 0.66
MBD3L4A6NDZ8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.18■□□□□ 0.66
MBD3L4A6NDZ8 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC19.18■□□□□ 0.66
MBD3L4A6NDZ8 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.18■□□□□ 0.66
MBD3L4A6NDZ8 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.18■□□□□ 0.66
MBD3L4A6NDZ8 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.18■□□□□ 0.66
MBD3L4A6NDZ8 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
MBD3L4A6NDZ8 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.18■□□□□ 0.66
MBD3L4A6NDZ8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms