Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TRIM49BA6NDI0 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TRIM49BA6NDI0 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
TRIM49BA6NDI0 AC010542.4-201ENST00000563151 1910 ntBASIC24.02■■□□□ 1.44
TRIM49BA6NDI0 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
TRIM49BA6NDI0 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRIM49BA6NDI0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
TRIM49BA6NDI0 SRD5A1P1-201ENST00000442297 786 ntBASIC24.01■■□□□ 1.43
TRIM49BA6NDI0 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
TRIM49BA6NDI0 MIR4466-201ENST00000606121 54 ntBASIC24.01■■□□□ 1.43
TRIM49BA6NDI0 AL031602.1-201ENST00000633169 911 ntBASIC24.01■■□□□ 1.43
TRIM49BA6NDI0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRIM49BA6NDI0 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRIM49BA6NDI0 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC24.01■■□□□ 1.43
TRIM49BA6NDI0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
TRIM49BA6NDI0 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC24.01■■□□□ 1.43
TRIM49BA6NDI0 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC24.01■■□□□ 1.43
TRIM49BA6NDI0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRIM49BA6NDI0 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TRIM49BA6NDI0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
TRIM49BA6NDI0 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
TRIM49BA6NDI0 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TRIM49BA6NDI0 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TRIM49BA6NDI0 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TRIM49BA6NDI0 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
TRIM49BA6NDI0 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
TRIM49BA6NDI0 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC24■■□□□ 1.43
TRIM49BA6NDI0 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC24■■□□□ 1.43
TRIM49BA6NDI0 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC24■■□□□ 1.43
TRIM49BA6NDI0 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC24■■□□□ 1.43
TRIM49BA6NDI0 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
TRIM49BA6NDI0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
TRIM49BA6NDI0 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TRIM49BA6NDI0 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
TRIM49BA6NDI0 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC24■■□□□ 1.43
TRIM49BA6NDI0 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC24■■□□□ 1.43
TRIM49BA6NDI0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC24■■□□□ 1.43
TRIM49BA6NDI0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC24■■□□□ 1.43
TRIM49BA6NDI0 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TRIM49BA6NDI0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
TRIM49BA6NDI0 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.99■■□□□ 1.43
TRIM49BA6NDI0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRIM49BA6NDI0 RPP21-222ENST00000433076 577 ntTSL 2 BASIC23.99■■□□□ 1.43
TRIM49BA6NDI0 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.99■■□□□ 1.43
TRIM49BA6NDI0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC23.99■■□□□ 1.43
TRIM49BA6NDI0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRIM49BA6NDI0 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
TRIM49BA6NDI0 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM49BA6NDI0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC23.98■■□□□ 1.43
TRIM49BA6NDI0 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
TRIM49BA6NDI0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM49BA6NDI0 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC23.98■■□□□ 1.43
TRIM49BA6NDI0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.98■■□□□ 1.43
TRIM49BA6NDI0 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM49BA6NDI0 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.98■■□□□ 1.43
TRIM49BA6NDI0 STX4-202ENST00000394998 1498 ntTSL 2 BASIC23.98■■□□□ 1.43
TRIM49BA6NDI0 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM49BA6NDI0 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRIM49BA6NDI0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRIM49BA6NDI0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRIM49BA6NDI0 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
TRIM49BA6NDI0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
TRIM49BA6NDI0 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC23.97■■□□□ 1.43
TRIM49BA6NDI0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRIM49BA6NDI0 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRIM49BA6NDI0 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC23.97■■□□□ 1.43
TRIM49BA6NDI0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRIM49BA6NDI0 AL137060.1-201ENST00000618151 2648 ntBASIC23.97■■□□□ 1.43
TRIM49BA6NDI0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
TRIM49BA6NDI0 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
TRIM49BA6NDI0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC23.96■■□□□ 1.43
TRIM49BA6NDI0 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM49BA6NDI0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM49BA6NDI0 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM49BA6NDI0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM49BA6NDI0 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM49BA6NDI0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC23.96■■□□□ 1.43
TRIM49BA6NDI0 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.96■■□□□ 1.43
TRIM49BA6NDI0 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC23.96■■□□□ 1.43
TRIM49BA6NDI0 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC23.96■■□□□ 1.43
TRIM49BA6NDI0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM49BA6NDI0 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.42
TRIM49BA6NDI0 FAM99A-202ENST00000538190 1989 ntBASIC23.95■■□□□ 1.42
TRIM49BA6NDI0 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TRIM49BA6NDI0 AC131281.2-201ENST00000520478 145 ntBASIC23.95■■□□□ 1.42
TRIM49BA6NDI0 AC010525.1-201ENST00000585559 441 ntBASIC23.95■■□□□ 1.42
TRIM49BA6NDI0 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
TRIM49BA6NDI0 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.95■■□□□ 1.42
TRIM49BA6NDI0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TRIM49BA6NDI0 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC23.95■■□□□ 1.42
TRIM49BA6NDI0 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
TRIM49BA6NDI0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
TRIM49BA6NDI0 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TRIM49BA6NDI0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
TRIM49BA6NDI0 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
TRIM49BA6NDI0 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
TRIM49BA6NDI0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM49BA6NDI0 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM49BA6NDI0 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC23.94■■□□□ 1.42
TRIM49BA6NDI0 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms