Protein–RNA interactions for Protein: A4FU28

CTAGE9, cTAGE family member 9, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTAGE9A4FU28 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CTAGE9A4FU28 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CTAGE9A4FU28 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
CTAGE9A4FU28 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CTAGE9A4FU28 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CTAGE9A4FU28 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC23.18■■□□□ 1.3
CTAGE9A4FU28 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
CTAGE9A4FU28 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.18■■□□□ 1.3
CTAGE9A4FU28 Z98882.1-201ENST00000622160 2253 ntBASIC23.18■■□□□ 1.3
CTAGE9A4FU28 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC23.18■■□□□ 1.3
CTAGE9A4FU28 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CTAGE9A4FU28 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC23.18■■□□□ 1.3
CTAGE9A4FU28 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC23.18■■□□□ 1.3
CTAGE9A4FU28 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CTAGE9A4FU28 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CTAGE9A4FU28 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CTAGE9A4FU28 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CTAGE9A4FU28 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CTAGE9A4FU28 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
CTAGE9A4FU28 FP325331.1-202ENST00000623531 1380 ntBASIC23.17■■□□□ 1.3
CTAGE9A4FU28 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CTAGE9A4FU28 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
CTAGE9A4FU28 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC23.17■■□□□ 1.3
CTAGE9A4FU28 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CTAGE9A4FU28 THA1P-201ENST00000590384 1145 ntBASIC23.17■■□□□ 1.3
CTAGE9A4FU28 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
CTAGE9A4FU28 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CTAGE9A4FU28 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CTAGE9A4FU28 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CTAGE9A4FU28 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CTAGE9A4FU28 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CTAGE9A4FU28 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CTAGE9A4FU28 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CTAGE9A4FU28 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CTAGE9A4FU28 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CTAGE9A4FU28 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CTAGE9A4FU28 TUB-203ENST00000534099 1759 ntTSL 2 BASIC23.17■■□□□ 1.3
CTAGE9A4FU28 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CTAGE9A4FU28 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC23.16■■□□□ 1.3
CTAGE9A4FU28 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CTAGE9A4FU28 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.16■■□□□ 1.3
CTAGE9A4FU28 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CTAGE9A4FU28 KRT18P24-201ENST00000344739 1156 ntBASIC23.16■■□□□ 1.3
CTAGE9A4FU28 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC23.16■■□□□ 1.3
CTAGE9A4FU28 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
CTAGE9A4FU28 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CTAGE9A4FU28 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CTAGE9A4FU28 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CTAGE9A4FU28 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
CTAGE9A4FU28 ME2-206ENST00000638410 2289 ntTSL 5 BASIC23.15■■□□□ 1.3
CTAGE9A4FU28 ME2-210ENST00000639255 2262 ntTSL 5 BASIC23.15■■□□□ 1.3
CTAGE9A4FU28 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CTAGE9A4FU28 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
CTAGE9A4FU28 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CTAGE9A4FU28 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CTAGE9A4FU28 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CTAGE9A4FU28 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CTAGE9A4FU28 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
CTAGE9A4FU28 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
CTAGE9A4FU28 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CTAGE9A4FU28 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC23.14■■□□□ 1.29
CTAGE9A4FU28 BHLHE23-202ENST00000612929 1109 ntBASIC23.14■■□□□ 1.29
CTAGE9A4FU28 AC009086.3-201ENST00000623486 1008 ntBASIC23.14■■□□□ 1.29
CTAGE9A4FU28 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
CTAGE9A4FU28 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.29
CTAGE9A4FU28 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC23.13■■□□□ 1.29
CTAGE9A4FU28 AF106564.1-201ENST00000607058 2553 ntBASIC23.13■■□□□ 1.29
CTAGE9A4FU28 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.13■■□□□ 1.29
CTAGE9A4FU28 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC23.13■■□□□ 1.29
CTAGE9A4FU28 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
CTAGE9A4FU28 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CTAGE9A4FU28 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CTAGE9A4FU28 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC23.13■■□□□ 1.29
CTAGE9A4FU28 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CTAGE9A4FU28 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CTAGE9A4FU28 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
CTAGE9A4FU28 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC23.13■■□□□ 1.29
CTAGE9A4FU28 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CTAGE9A4FU28 FEM1AP4-201ENST00000443167 1987 ntBASIC23.12■■□□□ 1.29
CTAGE9A4FU28 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC23.12■■□□□ 1.29
CTAGE9A4FU28 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
CTAGE9A4FU28 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC23.12■■□□□ 1.29
CTAGE9A4FU28 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CTAGE9A4FU28 AC004987.1-201ENST00000428627 508 ntBASIC23.12■■□□□ 1.29
CTAGE9A4FU28 ATP5G2P3-201ENST00000429083 425 ntBASIC23.12■■□□□ 1.29
CTAGE9A4FU28 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.12■■□□□ 1.29
CTAGE9A4FU28 CA15P2-201ENST00000611168 834 ntBASIC23.12■■□□□ 1.29
CTAGE9A4FU28 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CTAGE9A4FU28 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC23.12■■□□□ 1.29
CTAGE9A4FU28 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CTAGE9A4FU28 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.12■■□□□ 1.29
CTAGE9A4FU28 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CTAGE9A4FU28 AL157384.1-201ENST00000445995 2473 ntBASIC23.11■■□□□ 1.29
CTAGE9A4FU28 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC23.11■■□□□ 1.29
CTAGE9A4FU28 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC23.11■■□□□ 1.29
CTAGE9A4FU28 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
CTAGE9A4FU28 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CTAGE9A4FU28 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC23.11■■□□□ 1.29
CTAGE9A4FU28 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC23.11■■□□□ 1.29
CTAGE9A4FU28 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms