Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
RNF103-CHMP3A0A140T963 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
RNF103-CHMP3A0A140T963 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.86■□□□□ 0.93
RNF103-CHMP3A0A140T963 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
RNF103-CHMP3A0A140T963 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
RNF103-CHMP3A0A140T963 CD72-202ENST00000378430 585 ntTSL 3 BASIC20.86■□□□□ 0.93
RNF103-CHMP3A0A140T963 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
RNF103-CHMP3A0A140T963 LINC01529-204ENST00000636474 1715 ntBASIC20.86■□□□□ 0.93
RNF103-CHMP3A0A140T963 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF103-CHMP3A0A140T963 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.86■□□□□ 0.93
RNF103-CHMP3A0A140T963 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF103-CHMP3A0A140T963 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
RNF103-CHMP3A0A140T963 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.86■□□□□ 0.93
RNF103-CHMP3A0A140T963 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
RNF103-CHMP3A0A140T963 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF103-CHMP3A0A140T963 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.85■□□□□ 0.93
RNF103-CHMP3A0A140T963 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF103-CHMP3A0A140T963 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
RNF103-CHMP3A0A140T963 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF103-CHMP3A0A140T963 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF103-CHMP3A0A140T963 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF103-CHMP3A0A140T963 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF103-CHMP3A0A140T963 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
RNF103-CHMP3A0A140T963 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF103-CHMP3A0A140T963 AL451085.2-201ENST00000605085 799 ntBASIC20.85■□□□□ 0.93
RNF103-CHMP3A0A140T963 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF103-CHMP3A0A140T963 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF103-CHMP3A0A140T963 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC20.85■□□□□ 0.93
RNF103-CHMP3A0A140T963 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF103-CHMP3A0A140T963 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF103-CHMP3A0A140T963 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
RNF103-CHMP3A0A140T963 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
RNF103-CHMP3A0A140T963 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF103-CHMP3A0A140T963 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF103-CHMP3A0A140T963 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
RNF103-CHMP3A0A140T963 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF103-CHMP3A0A140T963 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.84■□□□□ 0.93
RNF103-CHMP3A0A140T963 TSPY9P-201ENST00000440215 945 ntBASIC20.84■□□□□ 0.93
RNF103-CHMP3A0A140T963 TSPY11P-201ENST00000442607 1045 ntBASIC20.84■□□□□ 0.93
RNF103-CHMP3A0A140T963 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF103-CHMP3A0A140T963 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF103-CHMP3A0A140T963 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
RNF103-CHMP3A0A140T963 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC20.84■□□□□ 0.93
RNF103-CHMP3A0A140T963 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
RNF103-CHMP3A0A140T963 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF103-CHMP3A0A140T963 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF103-CHMP3A0A140T963 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
RNF103-CHMP3A0A140T963 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
RNF103-CHMP3A0A140T963 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
RNF103-CHMP3A0A140T963 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC20.83■□□□□ 0.93
RNF103-CHMP3A0A140T963 AC010997.5-201ENST00000609182 354 ntBASIC20.83■□□□□ 0.93
RNF103-CHMP3A0A140T963 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.83■□□□□ 0.92
RNF103-CHMP3A0A140T963 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF103-CHMP3A0A140T963 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
RNF103-CHMP3A0A140T963 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
RNF103-CHMP3A0A140T963 FP325331.1-202ENST00000623531 1380 ntBASIC20.83■□□□□ 0.92
RNF103-CHMP3A0A140T963 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
RNF103-CHMP3A0A140T963 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.83■□□□□ 0.92
RNF103-CHMP3A0A140T963 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF103-CHMP3A0A140T963 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF103-CHMP3A0A140T963 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
RNF103-CHMP3A0A140T963 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
RNF103-CHMP3A0A140T963 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
RNF103-CHMP3A0A140T963 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF103-CHMP3A0A140T963 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.82■□□□□ 0.92
RNF103-CHMP3A0A140T963 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF103-CHMP3A0A140T963 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
RNF103-CHMP3A0A140T963 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF103-CHMP3A0A140T963 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
RNF103-CHMP3A0A140T963 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.82■□□□□ 0.92
RNF103-CHMP3A0A140T963 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF103-CHMP3A0A140T963 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF103-CHMP3A0A140T963 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RNF103-CHMP3A0A140T963 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF103-CHMP3A0A140T963 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RNF103-CHMP3A0A140T963 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
RNF103-CHMP3A0A140T963 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF103-CHMP3A0A140T963 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.81■□□□□ 0.92
RNF103-CHMP3A0A140T963 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF103-CHMP3A0A140T963 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF103-CHMP3A0A140T963 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF103-CHMP3A0A140T963 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.81■□□□□ 0.92
RNF103-CHMP3A0A140T963 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF103-CHMP3A0A140T963 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.81■□□□□ 0.92
RNF103-CHMP3A0A140T963 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.81■□□□□ 0.92
RNF103-CHMP3A0A140T963 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF103-CHMP3A0A140T963 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF103-CHMP3A0A140T963 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
RNF103-CHMP3A0A140T963 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
RNF103-CHMP3A0A140T963 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF103-CHMP3A0A140T963 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
RNF103-CHMP3A0A140T963 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RNF103-CHMP3A0A140T963 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RNF103-CHMP3A0A140T963 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RNF103-CHMP3A0A140T963 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.8■□□□□ 0.92
RNF103-CHMP3A0A140T963 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RNF103-CHMP3A0A140T963 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RNF103-CHMP3A0A140T963 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
RNF103-CHMP3A0A140T963 AC009102.2-201ENST00000606772 1639 ntBASIC20.8■□□□□ 0.92
RNF103-CHMP3A0A140T963 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms