Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV4-1A0A0J9YWV2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV4-1A0A0J9YWV2 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
TRBV4-1A0A0J9YWV2 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV4-1A0A0J9YWV2 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV4-1A0A0J9YWV2 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV4-1A0A0J9YWV2 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.95■□□□□ 0.78
TRBV4-1A0A0J9YWV2 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV4-1A0A0J9YWV2 AC005229.4-201ENST00000610085 2198 ntBASIC19.95■□□□□ 0.78
TRBV4-1A0A0J9YWV2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.95■□□□□ 0.78
TRBV4-1A0A0J9YWV2 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV4-1A0A0J9YWV2 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV4-1A0A0J9YWV2 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV4-1A0A0J9YWV2 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV4-1A0A0J9YWV2 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
TRBV4-1A0A0J9YWV2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC19.94■□□□□ 0.78
TRBV4-1A0A0J9YWV2 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TRBV4-1A0A0J9YWV2 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.94■□□□□ 0.78
TRBV4-1A0A0J9YWV2 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV4-1A0A0J9YWV2 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV4-1A0A0J9YWV2 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV4-1A0A0J9YWV2 MTDHP2-201ENST00000601468 714 ntBASIC19.94■□□□□ 0.78
TRBV4-1A0A0J9YWV2 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.94■□□□□ 0.78
TRBV4-1A0A0J9YWV2 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV4-1A0A0J9YWV2 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
TRBV4-1A0A0J9YWV2 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
TRBV4-1A0A0J9YWV2 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV4-1A0A0J9YWV2 PKD1P6-201ENST00000343738 4769 ntBASIC19.94■□□□□ 0.78
TRBV4-1A0A0J9YWV2 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRBV4-1A0A0J9YWV2 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC19.94■□□□□ 0.78
TRBV4-1A0A0J9YWV2 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.93■□□□□ 0.78
TRBV4-1A0A0J9YWV2 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.93■□□□□ 0.78
TRBV4-1A0A0J9YWV2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TRBV4-1A0A0J9YWV2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV4-1A0A0J9YWV2 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV4-1A0A0J9YWV2 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV4-1A0A0J9YWV2 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV4-1A0A0J9YWV2 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV4-1A0A0J9YWV2 AC244015.2-201ENST00000616358 1861 ntBASIC19.93■□□□□ 0.78
TRBV4-1A0A0J9YWV2 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.93■□□□□ 0.78
TRBV4-1A0A0J9YWV2 KRT125P-201ENST00000546827 989 ntBASIC19.93■□□□□ 0.78
TRBV4-1A0A0J9YWV2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV4-1A0A0J9YWV2 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.93■□□□□ 0.78
TRBV4-1A0A0J9YWV2 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV4-1A0A0J9YWV2 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRBV4-1A0A0J9YWV2 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV4-1A0A0J9YWV2 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV4-1A0A0J9YWV2 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.92■□□□□ 0.78
TRBV4-1A0A0J9YWV2 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV4-1A0A0J9YWV2 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.92■□□□□ 0.78
TRBV4-1A0A0J9YWV2 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV4-1A0A0J9YWV2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.92■□□□□ 0.78
TRBV4-1A0A0J9YWV2 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV4-1A0A0J9YWV2 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
TRBV4-1A0A0J9YWV2 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRBV4-1A0A0J9YWV2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.92■□□□□ 0.78
TRBV4-1A0A0J9YWV2 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV4-1A0A0J9YWV2 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV4-1A0A0J9YWV2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
TRBV4-1A0A0J9YWV2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
TRBV4-1A0A0J9YWV2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.91■□□□□ 0.78
TRBV4-1A0A0J9YWV2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TRBV4-1A0A0J9YWV2 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV4-1A0A0J9YWV2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC19.91■□□□□ 0.78
TRBV4-1A0A0J9YWV2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV4-1A0A0J9YWV2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV4-1A0A0J9YWV2 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV4-1A0A0J9YWV2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV4-1A0A0J9YWV2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
TRBV4-1A0A0J9YWV2 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV4-1A0A0J9YWV2 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.91■□□□□ 0.78
TRBV4-1A0A0J9YWV2 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
TRBV4-1A0A0J9YWV2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV4-1A0A0J9YWV2 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV4-1A0A0J9YWV2 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRBV4-1A0A0J9YWV2 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV4-1A0A0J9YWV2 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.9■□□□□ 0.78
TRBV4-1A0A0J9YWV2 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV4-1A0A0J9YWV2 Z92544.1-202ENST00000571933 1220 ntBASIC19.9■□□□□ 0.78
TRBV4-1A0A0J9YWV2 MIR4787-201ENST00000607364 84 ntBASIC19.9■□□□□ 0.78
TRBV4-1A0A0J9YWV2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.9■□□□□ 0.78
TRBV4-1A0A0J9YWV2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRBV4-1A0A0J9YWV2 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC19.9■□□□□ 0.78
TRBV4-1A0A0J9YWV2 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV4-1A0A0J9YWV2 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV4-1A0A0J9YWV2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV4-1A0A0J9YWV2 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV4-1A0A0J9YWV2 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.89■□□□□ 0.77
TRBV4-1A0A0J9YWV2 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV4-1A0A0J9YWV2 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
TRBV4-1A0A0J9YWV2 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC19.89■□□□□ 0.77
TRBV4-1A0A0J9YWV2 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC19.89■□□□□ 0.77
TRBV4-1A0A0J9YWV2 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC19.89■□□□□ 0.77
TRBV4-1A0A0J9YWV2 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC19.89■□□□□ 0.77
TRBV4-1A0A0J9YWV2 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRBV4-1A0A0J9YWV2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
TRBV4-1A0A0J9YWV2 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV4-1A0A0J9YWV2 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV4-1A0A0J9YWV2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRBV4-1A0A0J9YWV2 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms