Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
LOC102724428A0A0B4J2F2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
LOC102724428A0A0B4J2F2 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC28.05■■■□□ 2.08
LOC102724428A0A0B4J2F2 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC28.05■■■□□ 2.08
LOC102724428A0A0B4J2F2 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC28.05■■■□□ 2.08
LOC102724428A0A0B4J2F2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC28.05■■■□□ 2.08
LOC102724428A0A0B4J2F2 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC28.05■■■□□ 2.08
LOC102724428A0A0B4J2F2 H19-210ENST00000439725 1929 ntTSL 2 BASIC28.04■■■□□ 2.08
LOC102724428A0A0B4J2F2 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
LOC102724428A0A0B4J2F2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
LOC102724428A0A0B4J2F2 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC28.04■■■□□ 2.08
LOC102724428A0A0B4J2F2 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC28.04■■■□□ 2.08
LOC102724428A0A0B4J2F2 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
LOC102724428A0A0B4J2F2 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC28.04■■■□□ 2.08
LOC102724428A0A0B4J2F2 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
LOC102724428A0A0B4J2F2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC28.04■■■□□ 2.08
LOC102724428A0A0B4J2F2 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
LOC102724428A0A0B4J2F2 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC28.04■■■□□ 2.08
LOC102724428A0A0B4J2F2 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
LOC102724428A0A0B4J2F2 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
LOC102724428A0A0B4J2F2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
LOC102724428A0A0B4J2F2 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
LOC102724428A0A0B4J2F2 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
LOC102724428A0A0B4J2F2 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
LOC102724428A0A0B4J2F2 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
LOC102724428A0A0B4J2F2 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
LOC102724428A0A0B4J2F2 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
LOC102724428A0A0B4J2F2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC28.03■■■□□ 2.08
LOC102724428A0A0B4J2F2 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC28.03■■■□□ 2.08
LOC102724428A0A0B4J2F2 AC004812.2-201ENST00000611079 2094 ntBASIC28.03■■■□□ 2.08
LOC102724428A0A0B4J2F2 LINC00543-201ENST00000567234 1845 ntBASIC28.02■■■□□ 2.08
LOC102724428A0A0B4J2F2 DUSP8P3-201ENST00000399571 1760 ntBASIC28.02■■■□□ 2.08
LOC102724428A0A0B4J2F2 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC28.02■■■□□ 2.08
LOC102724428A0A0B4J2F2 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
LOC102724428A0A0B4J2F2 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
LOC102724428A0A0B4J2F2 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC28.02■■■□□ 2.08
LOC102724428A0A0B4J2F2 MIR4651-201ENST00000582622 73 ntBASIC28.02■■■□□ 2.08
LOC102724428A0A0B4J2F2 MYCNOS-205ENST00000641950 531 ntBASIC28.02■■■□□ 2.08
LOC102724428A0A0B4J2F2 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
LOC102724428A0A0B4J2F2 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC28.01■■■□□ 2.08
LOC102724428A0A0B4J2F2 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
LOC102724428A0A0B4J2F2 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC28.01■■■□□ 2.07
LOC102724428A0A0B4J2F2 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC28.01■■■□□ 2.07
LOC102724428A0A0B4J2F2 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC28.01■■■□□ 2.07
LOC102724428A0A0B4J2F2 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC28.01■■■□□ 2.07
LOC102724428A0A0B4J2F2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC28.01■■■□□ 2.07
LOC102724428A0A0B4J2F2 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC28.01■■■□□ 2.07
LOC102724428A0A0B4J2F2 PXK-203ENST00000383715 1756 ntTSL 5 BASIC28.01■■■□□ 2.07
LOC102724428A0A0B4J2F2 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC28■■■□□ 2.07
LOC102724428A0A0B4J2F2 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC28■■■□□ 2.07
LOC102724428A0A0B4J2F2 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC28■■■□□ 2.07
LOC102724428A0A0B4J2F2 AC069152.1-201ENST00000438030 544 ntBASIC28■■■□□ 2.07
LOC102724428A0A0B4J2F2 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC28■■■□□ 2.07
LOC102724428A0A0B4J2F2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC28■■■□□ 2.07
LOC102724428A0A0B4J2F2 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC28■■■□□ 2.07
LOC102724428A0A0B4J2F2 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC28■■■□□ 2.07
LOC102724428A0A0B4J2F2 AP001160.3-201ENST00000601484 763 ntBASIC28■■■□□ 2.07
LOC102724428A0A0B4J2F2 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC28■■■□□ 2.07
LOC102724428A0A0B4J2F2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC27.99■■■□□ 2.07
LOC102724428A0A0B4J2F2 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC27.99■■■□□ 2.07
LOC102724428A0A0B4J2F2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
LOC102724428A0A0B4J2F2 PFKL-212ENST00000628044 129 ntTSL 3 BASIC27.99■■■□□ 2.07
LOC102724428A0A0B4J2F2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
LOC102724428A0A0B4J2F2 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC27.99■■■□□ 2.07
LOC102724428A0A0B4J2F2 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC27.99■■■□□ 2.07
LOC102724428A0A0B4J2F2 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
LOC102724428A0A0B4J2F2 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC27.98■■■□□ 2.07
LOC102724428A0A0B4J2F2 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
LOC102724428A0A0B4J2F2 SLC29A4P1-201ENST00000398760 971 ntBASIC27.98■■■□□ 2.07
LOC102724428A0A0B4J2F2 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC27.98■■■□□ 2.07
LOC102724428A0A0B4J2F2 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
LOC102724428A0A0B4J2F2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
LOC102724428A0A0B4J2F2 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC27.98■■■□□ 2.07
LOC102724428A0A0B4J2F2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC27.98■■■□□ 2.07
LOC102724428A0A0B4J2F2 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC27.97■■■□□ 2.07
LOC102724428A0A0B4J2F2 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
LOC102724428A0A0B4J2F2 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
LOC102724428A0A0B4J2F2 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC27.97■■■□□ 2.07
LOC102724428A0A0B4J2F2 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC27.97■■■□□ 2.07
LOC102724428A0A0B4J2F2 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC27.97■■■□□ 2.07
LOC102724428A0A0B4J2F2 CNN2P6-201ENST00000439038 900 ntBASIC27.97■■■□□ 2.07
LOC102724428A0A0B4J2F2 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC27.97■■■□□ 2.07
LOC102724428A0A0B4J2F2 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC27.97■■■□□ 2.07
LOC102724428A0A0B4J2F2 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
LOC102724428A0A0B4J2F2 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC27.97■■■□□ 2.07
LOC102724428A0A0B4J2F2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC27.96■■■□□ 2.07
LOC102724428A0A0B4J2F2 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
LOC102724428A0A0B4J2F2 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
LOC102724428A0A0B4J2F2 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
LOC102724428A0A0B4J2F2 RGMA-211ENST00000557420 989 ntTSL 3 BASIC27.96■■■□□ 2.07
LOC102724428A0A0B4J2F2 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
LOC102724428A0A0B4J2F2 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC27.96■■■□□ 2.07
LOC102724428A0A0B4J2F2 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.07
LOC102724428A0A0B4J2F2 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC27.95■■■□□ 2.07
LOC102724428A0A0B4J2F2 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC27.95■■■□□ 2.07
LOC102724428A0A0B4J2F2 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC27.95■■■□□ 2.06
LOC102724428A0A0B4J2F2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC27.95■■■□□ 2.06
LOC102724428A0A0B4J2F2 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC27.95■■■□□ 2.06
LOC102724428A0A0B4J2F2 MFF-207ENST00000409565 1548 ntTSL 2 BASIC27.95■■■□□ 2.06
LOC102724428A0A0B4J2F2 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms