Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV13-1A0A0B4J241 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV13-1A0A0B4J241 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
TRAV13-1A0A0B4J241 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV13-1A0A0B4J241 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV13-1A0A0B4J241 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV13-1A0A0B4J241 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV13-1A0A0B4J241 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
TRAV13-1A0A0B4J241 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
TRAV13-1A0A0B4J241 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC15.11■□□□□ 0.01
TRAV13-1A0A0B4J241 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC15.11■□□□□ 0.01
TRAV13-1A0A0B4J241 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC15.1■□□□□ 0.01
TRAV13-1A0A0B4J241 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV13-1A0A0B4J241 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV13-1A0A0B4J241 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC15.1■□□□□ 0.01
TRAV13-1A0A0B4J241 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
TRAV13-1A0A0B4J241 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TRAV13-1A0A0B4J241 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
TRAV13-1A0A0B4J241 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV13-1A0A0B4J241 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
TRAV13-1A0A0B4J241 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV13-1A0A0B4J241 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV13-1A0A0B4J241 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV13-1A0A0B4J241 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
TRAV13-1A0A0B4J241 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV13-1A0A0B4J241 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV13-1A0A0B4J241 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV13-1A0A0B4J241 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC15.1■□□□□ 0.01
TRAV13-1A0A0B4J241 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
TRAV13-1A0A0B4J241 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV13-1A0A0B4J241 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV13-1A0A0B4J241 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TRAV13-1A0A0B4J241 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV13-1A0A0B4J241 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV13-1A0A0B4J241 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV13-1A0A0B4J241 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV13-1A0A0B4J241 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
TRAV13-1A0A0B4J241 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV13-1A0A0B4J241 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV13-1A0A0B4J241 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC15.09■□□□□ 0.01
TRAV13-1A0A0B4J241 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV13-1A0A0B4J241 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV13-1A0A0B4J241 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV13-1A0A0B4J241 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TRAV13-1A0A0B4J241 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV13-1A0A0B4J241 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV13-1A0A0B4J241 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TRAV13-1A0A0B4J241 LINC01529-204ENST00000636474 1715 ntBASIC15.09■□□□□ 0.01
TRAV13-1A0A0B4J241 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
TRAV13-1A0A0B4J241 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV13-1A0A0B4J241 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC15.08■□□□□ 0.01
TRAV13-1A0A0B4J241 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV13-1A0A0B4J241 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV13-1A0A0B4J241 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV13-1A0A0B4J241 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAV13-1A0A0B4J241 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TRAV13-1A0A0B4J241 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAV13-1A0A0B4J241 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC15.08■□□□□ 0
TRAV13-1A0A0B4J241 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV13-1A0A0B4J241 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV13-1A0A0B4J241 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV13-1A0A0B4J241 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TRAV13-1A0A0B4J241 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV13-1A0A0B4J241 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV13-1A0A0B4J241 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC15.07■□□□□ 0
TRAV13-1A0A0B4J241 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TRAV13-1A0A0B4J241 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV13-1A0A0B4J241 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV13-1A0A0B4J241 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV13-1A0A0B4J241 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC15.07■□□□□ 0
TRAV13-1A0A0B4J241 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV13-1A0A0B4J241 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV13-1A0A0B4J241 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC15.07■□□□□ 0
TRAV13-1A0A0B4J241 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
TRAV13-1A0A0B4J241 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV13-1A0A0B4J241 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV13-1A0A0B4J241 TSPY13P-201ENST00000338964 914 ntBASIC15.07■□□□□ 0
TRAV13-1A0A0B4J241 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC15.07■□□□□ 0
TRAV13-1A0A0B4J241 SNX5-217ENST00000606557 1087 ntBASIC15.07■□□□□ 0
TRAV13-1A0A0B4J241 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV13-1A0A0B4J241 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV13-1A0A0B4J241 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV13-1A0A0B4J241 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC15.07■□□□□ 0
TRAV13-1A0A0B4J241 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV13-1A0A0B4J241 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV13-1A0A0B4J241 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV13-1A0A0B4J241 SLC25A24-204ENST00000569674 2357 ntBASIC15.06■□□□□ 0
TRAV13-1A0A0B4J241 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TRAV13-1A0A0B4J241 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV13-1A0A0B4J241 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC15.06■□□□□ 0
TRAV13-1A0A0B4J241 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV13-1A0A0B4J241 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV13-1A0A0B4J241 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC15.06■□□□□ 0
TRAV13-1A0A0B4J241 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC15.06■□□□□ 0
TRAV13-1A0A0B4J241 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC15.06■□□□□ 0
TRAV13-1A0A0B4J241 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC15.06■□□□□ 0
TRAV13-1A0A0B4J241 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC15.06■□□□□ 0
TRAV13-1A0A0B4J241 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
TRAV13-1A0A0B4J241 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC15.06■□□□□ 0
TRAV13-1A0A0B4J241 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms