Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 AC245884.11-201ENST00000616950 1734 ntTSL 3 BASIC10.84□□□□□ -0.67
NICN1Q9BSH3 AC005537.1-203ENST00000629291 1748 ntTSL 5 BASIC10.84□□□□□ -0.67
NICN1Q9BSH3 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NICN1Q9BSH3 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
NICN1Q9BSH3 LACC1-201ENST00000325686 4099 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
NICN1Q9BSH3 LINC01122-207ENST00000452840 4077 ntTSL 5 BASIC10.84□□□□□ -0.67
NICN1Q9BSH3 SLA2-201ENST00000262866 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 INTS9-201ENST00000416984 2759 ntTSL 2 BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 KIAA0513-206ENST00000566428 7772 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 DDX3P1-201ENST00000418231 1950 ntBASIC10.83□□□□□ -0.68
NICN1Q9BSH3 CTRC-201ENST00000375943 3147 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 AP001198.1-201ENST00000586278 1852 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 TSPAN9-206ENST00000537971 4284 ntAPPRIS P1 TSL 3 BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 AL021392.1-201ENST00000426112 2949 ntTSL 2 BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 TMEM239-201ENST00000361033 3892 ntTSL 2 BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 SPAG5-201ENST00000321765 4040 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 ELOA2-201ENST00000332567 3050 ntAPPRIS P2 BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 TSC22D3-202ENST00000372382 1216 ntTSL 3 BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 IDS-203ENST00000428056 1213 ntTSL 2 BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 AC092638.2-201ENST00000441105 947 ntBASIC10.83□□□□□ -0.68
NICN1Q9BSH3 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 RPL35P9-201ENST00000446059 350 ntBASIC10.83□□□□□ -0.68
NICN1Q9BSH3 AC010136.1-201ENST00000450996 568 ntTSL 4 BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 TMEM14B-208ENST00000467317 1224 ntTSL 2 BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 PFN2-212ENST00000490975 858 ntTSL 4 BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 AC008026.2-201ENST00000495438 348 ntBASIC10.83□□□□□ -0.68
NICN1Q9BSH3 AC025257.1-201ENST00000550926 375 ntTSL 3 BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC10.83□□□□□ -0.68
NICN1Q9BSH3 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC10.83□□□□□ -0.68
NICN1Q9BSH3 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC10.83□□□□□ -0.68
NICN1Q9BSH3 LAMP5-201ENST00000246070 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 MAMLD1-205ENST00000432680 3224 ntAPPRIS ALT2 TSL 2 BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 CT55-202ENST00000344129 1728 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 SIGLEC6-206ENST00000436458 1713 ntTSL 2 BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 LINC00477-201ENST00000483544 1710 ntTSL 2 BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 CREBBP-202ENST00000382070 7598 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 LINC02052-202ENST00000427914 2285 ntTSL 2 BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 AL109615.2-201ENST00000455005 1608 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 FAM153B-211ENST00000510151 1641 ntAPPRIS P2 TSL 5 BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 FAM153A-216ENST00000510276 1641 ntAPPRIS P2 TSL 2 BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 LINC01442-202ENST00000618872 1600 ntTSL 2 BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 CAMSAP2-202ENST00000358823 7352 ntAPPRIS P3 TSL 5 BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 LGALS8-208ENST00000416919 6097 ntTSL 5 BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 CAMK2B-202ENST00000346990 1448 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 ADGRE3-203ENST00000443157 1971 ntTSL 2 BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 DDX25-201ENST00000263576 7555 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 NDUFAF6-202ENST00000396113 2549 ntTSL 5 BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 LINC00242-201ENST00000437615 2418 ntTSL 2 BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 MRVI1-209ENST00000531107 2887 ntAPPRIS P3 TSL 2 BASIC10.83□□□□□ -0.68
NICN1Q9BSH3 AGPAT1-206ENST00000395499 2496 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
NICN1Q9BSH3 AC026725.1-201ENST00000511327 1588 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
NICN1Q9BSH3 RIPOR1-205ENST00000540839 4260 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
NICN1Q9BSH3 VAC14-AS1-202ENST00000562507 4853 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
NICN1Q9BSH3 PROP1-201ENST00000308304 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NICN1Q9BSH3 NFASC-202ENST00000360049 10120 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
NICN1Q9BSH3 NFASC-225ENST00000539706 10135 ntAPPRIS ALT1 TSL 5 BASIC10.82□□□□□ -0.68
NICN1Q9BSH3 PCDHGB5-201ENST00000617380 4578 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
NICN1Q9BSH3 POTEB-202ENST00000439682 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NICN1Q9BSH3 PLXDC1-206ENST00000444911 2082 ntTSL 2 BASIC10.82□□□□□ -0.68
NICN1Q9BSH3 PSORS1C2-201ENST00000259845 1150 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NICN1Q9BSH3 AC022080.1-201ENST00000366255 781 ntBASIC10.82□□□□□ -0.68
NICN1Q9BSH3 GAPDHP29-201ENST00000429913 985 ntBASIC10.82□□□□□ -0.68
NICN1Q9BSH3 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC10.82□□□□□ -0.68
NICN1Q9BSH3 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
NICN1Q9BSH3 UPF3AP2-201ENST00000457924 1132 ntBASIC10.82□□□□□ -0.68
NICN1Q9BSH3 AC092903.1-201ENST00000466506 262 ntBASIC10.82□□□□□ -0.68
NICN1Q9BSH3 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC10.82□□□□□ -0.68
NICN1Q9BSH3 RN7SL769P-201ENST00000469386 295 ntBASIC10.82□□□□□ -0.68
NICN1Q9BSH3 MEF2C-AS1-205ENST00000509179 388 ntTSL 5 BASIC10.82□□□□□ -0.68
NICN1Q9BSH3 SRPK2P-201ENST00000523408 1100 ntBASIC10.82□□□□□ -0.68
NICN1Q9BSH3 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
NICN1Q9BSH3 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC10.82□□□□□ -0.68
NICN1Q9BSH3 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC10.82□□□□□ -0.68
NICN1Q9BSH3 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC10.82□□□□□ -0.68
NICN1Q9BSH3 RN7SL678P-201ENST00000579533 299 ntBASIC10.82□□□□□ -0.68
NICN1Q9BSH3 KXD1-211ENST00000599319 707 ntAPPRIS P1 TSL 3 BASIC10.82□□□□□ -0.68
NICN1Q9BSH3 MIR6799-201ENST00000620297 69 ntBASIC10.82□□□□□ -0.68
NICN1Q9BSH3 SNX12-206ENST00000622259 661 ntTSL 5 BASIC10.82□□□□□ -0.68
NICN1Q9BSH3 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC10.82□□□□□ -0.68
NICN1Q9BSH3 LBP-201ENST00000217407 1961 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NICN1Q9BSH3 ZNF397-209ENST00000591206 1516 ntTSL 2 BASIC10.82□□□□□ -0.68
NICN1Q9BSH3 B4GALT1-201ENST00000379731 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NICN1Q9BSH3 LRRC63-202ENST00000446175 2114 ntAPPRIS P2 TSL 5 BASIC10.82□□□□□ -0.68
NICN1Q9BSH3 EZR-201ENST00000337147 3068 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
NICN1Q9BSH3 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
NICN1Q9BSH3 GREB1L-202ENST00000424526 6052 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
NICN1Q9BSH3 CNGA3-203ENST00000393504 3841 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
NICN1Q9BSH3 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
NICN1Q9BSH3 COG4-202ENST00000393612 2756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
NICN1Q9BSH3 TPX2-202ENST00000340513 3605 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 148.8 ms