Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 AC080038.2-201ENST00000617734 423 ntBASIC13.17□□□□□ -0.3
MTHFRP42898 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
MTHFRP42898 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
MTHFRP42898 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
MTHFRP42898 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
MTHFRP42898 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MTHFRP42898 CHEK1-203ENST00000428830 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MTHFRP42898 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC13.17□□□□□ -0.3
MTHFRP42898 HPX-201ENST00000265983 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MTHFRP42898 EIF3LP1-201ENST00000554099 1658 ntBASIC13.17□□□□□ -0.3
MTHFRP42898 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC13.17□□□□□ -0.3
MTHFRP42898 PARP10-203ENST00000524918 3469 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
MTHFRP42898 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC13.17□□□□□ -0.3
MTHFRP42898 PRAMEF20-202ENST00000602960 1502 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
MTHFRP42898 AFF1-201ENST00000307808 9390 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
MTHFRP42898 ZNF185-205ENST00000370270 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
MTHFRP42898 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
MTHFRP42898 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MTHFRP42898 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MTHFRP42898 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.17□□□□□ -0.3
MTHFRP42898 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
MTHFRP42898 EBF2-203ENST00000520164 5145 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
MTHFRP42898 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
MTHFRP42898 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
MTHFRP42898 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC13.16□□□□□ -0.3
MTHFRP42898 LEMD2-207ENST00000508327 1306 ntTSL 2 BASIC13.16□□□□□ -0.3
MTHFRP42898 LINC01837-201ENST00000590021 1320 ntTSL 5 BASIC13.16□□□□□ -0.3
MTHFRP42898 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
MTHFRP42898 NEK3-205ENST00000610828 2396 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
MTHFRP42898 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC13.16□□□□□ -0.3
MTHFRP42898 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
MTHFRP42898 AL133387.2-201ENST00000422661 2222 ntTSL 2 BASIC13.16□□□□□ -0.3
MTHFRP42898 LINC00523-206ENST00000556697 2071 ntTSL 2 BASIC13.16□□□□□ -0.3
MTHFRP42898 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
MTHFRP42898 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
MTHFRP42898 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC13.16□□□□□ -0.3
MTHFRP42898 TIRAP-201ENST00000392678 1264 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
MTHFRP42898 CAPG-204ENST00000409724 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
MTHFRP42898 AL928921.1-201ENST00000441033 708 ntTSL 3 BASIC13.16□□□□□ -0.3
MTHFRP42898 TEPP-202ENST00000441824 998 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
MTHFRP42898 AC005996.2-201ENST00000465549 564 ntTSL 4 BASIC13.16□□□□□ -0.3
MTHFRP42898 PRDM2-214ENST00000505823 568 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
MTHFRP42898 AC010280.2-201ENST00000507733 410 ntTSL 2 BASIC13.16□□□□□ -0.3
MTHFRP42898 SLC25A5P6-201ENST00000515328 886 ntBASIC13.16□□□□□ -0.3
MTHFRP42898 AC090192.2-201ENST00000517482 553 ntTSL 4 BASIC13.16□□□□□ -0.3
MTHFRP42898 ODF3-203ENST00000525282 764 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
MTHFRP42898 AP001266.1-201ENST00000531155 1044 ntTSL 2 BASIC13.16□□□□□ -0.3
MTHFRP42898 AP003717.2-201ENST00000534962 898 ntBASIC13.16□□□□□ -0.3
MTHFRP42898 PSME2-213ENST00000560410 755 ntTSL 3 BASIC13.16□□□□□ -0.3
MTHFRP42898 AC008915.2-201ENST00000570080 730 ntTSL 5 BASIC13.16□□□□□ -0.3
MTHFRP42898 AC090236.1-201ENST00000590318 768 ntTSL 2 BASIC13.16□□□□□ -0.3
MTHFRP42898 AL390728.4-202ENST00000606173 430 ntTSL 3 BASIC13.16□□□□□ -0.3
MTHFRP42898 AC022392.1-201ENST00000609403 744 ntBASIC13.16□□□□□ -0.3
MTHFRP42898 Metazoa_SRP.168-201ENST00000621608 264 ntBASIC13.16□□□□□ -0.3
MTHFRP42898 RN7SK-201ENST00000636484 328 ntBASIC13.16□□□□□ -0.3
MTHFRP42898 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
MTHFRP42898 PMS2CL-202ENST00000403974 1529 ntBASIC13.16□□□□□ -0.3
MTHFRP42898 CCDC163-203ENST00000626657 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
MTHFRP42898 SQSTM1-201ENST00000360718 2253 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
MTHFRP42898 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
MTHFRP42898 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
MTHFRP42898 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
MTHFRP42898 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
MTHFRP42898 KCNT1-213ENST00000630792 3606 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
MTHFRP42898 ATG7-201ENST00000354449 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
MTHFRP42898 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
MTHFRP42898 PPP6C-203ENST00000451402 4349 ntTSL 2 BASIC13.16□□□□□ -0.3
MTHFRP42898 CSPG4P11-201ENST00000560634 4910 ntBASIC13.16□□□□□ -0.3
MTHFRP42898 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
MTHFRP42898 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
MTHFRP42898 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
MTHFRP42898 KCNAB1-203ENST00000389636 1806 ntTSL 2 BASIC13.16□□□□□ -0.3
MTHFRP42898 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
MTHFRP42898 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC13.15□□□□□ -0.3
MTHFRP42898 NAA50-203ENST00000477813 1945 ntTSL 5 BASIC13.15□□□□□ -0.3
MTHFRP42898 PER1-202ENST00000354903 3115 ntTSL 2 BASIC13.15□□□□□ -0.3
MTHFRP42898 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC13.15□□□□□ -0.3
MTHFRP42898 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC13.15□□□□□ -0.3
MTHFRP42898 PPFIA4-201ENST00000272198 5045 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
MTHFRP42898 ALG8-202ENST00000376156 1677 ntTSL 2 BASIC13.15□□□□□ -0.3
MTHFRP42898 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
MTHFRP42898 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
MTHFRP42898 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC13.15□□□□□ -0.3
MTHFRP42898 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
MTHFRP42898 ZNF286B-205ENST00000545289 5328 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
MTHFRP42898 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
MTHFRP42898 BET1-201ENST00000222547 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MTHFRP42898 MYF5-201ENST00000228644 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MTHFRP42898 C8orf86-202ENST00000437935 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
MTHFRP42898 GOLGA8Q-201ENST00000562783 1899 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
MTHFRP42898 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
MTHFRP42898 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MTHFRP42898 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MTHFRP42898 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
MTHFRP42898 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
MTHFRP42898 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.15□□□□□ -0.3
MTHFRP42898 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
MTHFRP42898 SLC16A2-201ENST00000587091 4161 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MTHFRP42898 OAZ3-201ENST00000321531 851 ntTSL 5 BASIC13.15□□□□□ -0.3
MTHFRP42898 SUGT1-202ENST00000343788 1217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms