Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 PML-207ENST00000435786 3643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SCN2BO60939 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SCN2BO60939 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
SCN2BO60939 FAM107A-204ENST00000464064 2159 ntTSL 2 BASIC11.98□□□□□ -0.49
SCN2BO60939 GNL3-201ENST00000394799 2041 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
SCN2BO60939 AL591643.1-201ENST00000561587 1900 ntBASIC11.98□□□□□ -0.49
SCN2BO60939 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SCN2BO60939 APTX-201ENST00000309615 1859 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SCN2BO60939 AL590683.1-201ENST00000439059 1849 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SCN2BO60939 GEMIN8-202ENST00000380523 1682 ntAPPRIS P2 TSL 2 BASIC11.98□□□□□ -0.49
SCN2BO60939 FAM153B-211ENST00000510151 1641 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
SCN2BO60939 FAM153A-216ENST00000510276 1641 ntAPPRIS P2 TSL 2 BASIC11.98□□□□□ -0.49
SCN2BO60939 LVRN-201ENST00000357872 4581 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SCN2BO60939 FAM95B1-201ENST00000455995 4236 ntTSL 2 BASIC11.98□□□□□ -0.49
SCN2BO60939 FAM90A22P-201ENST00000400142 1395 ntBASIC11.98□□□□□ -0.49
SCN2BO60939 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC11.98□□□□□ -0.49
SCN2BO60939 GLUL-204ENST00000417584 4065 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
SCN2BO60939 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SCN2BO60939 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SCN2BO60939 CREB3L4-203ENST00000368601 950 ntTSL 2 BASIC11.98□□□□□ -0.49
SCN2BO60939 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC11.98□□□□□ -0.49
SCN2BO60939 ZNF662-202ENST00000422021 436 ntTSL 2 BASIC11.98□□□□□ -0.49
SCN2BO60939 LINC01503-201ENST00000423122 545 ntTSL 2 BASIC11.98□□□□□ -0.49
SCN2BO60939 CYP2F2P-201ENST00000437853 1056 ntBASIC11.98□□□□□ -0.49
SCN2BO60939 VDAC1P13-201ENST00000447826 859 ntBASIC11.98□□□□□ -0.49
SCN2BO60939 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC11.98□□□□□ -0.49
SCN2BO60939 IGHEP2-201ENST00000519308 1256 ntBASIC11.98□□□□□ -0.49
SCN2BO60939 WASIR2-201ENST00000527434 1054 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SCN2BO60939 AP003108.1-201ENST00000534856 554 ntTSL 4 BASIC11.98□□□□□ -0.49
SCN2BO60939 TMED1-204ENST00000588289 541 ntTSL 2 BASIC11.98□□□□□ -0.49
SCN2BO60939 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC11.98□□□□□ -0.49
SCN2BO60939 GMFG-209ENST00000600322 622 ntTSL 5 BASIC11.98□□□□□ -0.49
SCN2BO60939 PEBP1P2-201ENST00000603980 558 ntBASIC11.98□□□□□ -0.49
SCN2BO60939 RN7SL736P-201ENST00000613111 269 ntBASIC11.98□□□□□ -0.49
SCN2BO60939 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC11.98□□□□□ -0.49
SCN2BO60939 AC010601.2-201ENST00000623060 774 ntBASIC11.98□□□□□ -0.49
SCN2BO60939 AP000769.1-203ENST00000637245 208 ntBASIC11.98□□□□□ -0.49
SCN2BO60939 PAX6-237ENST00000638696 1203 ntTSL 5 BASIC11.98□□□□□ -0.49
SCN2BO60939 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SCN2BO60939 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SCN2BO60939 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SCN2BO60939 TRAF3IP3-203ENST00000367025 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
SCN2BO60939 ADGRE3-203ENST00000443157 1971 ntTSL 2 BASIC11.98□□□□□ -0.49
SCN2BO60939 DDR1-238ENST00000446312 3202 ntTSL 5 BASIC11.98□□□□□ -0.49
SCN2BO60939 LINC01898-201ENST00000564156 1903 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
SCN2BO60939 MRPL22-207ENST00000523037 3176 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
SCN2BO60939 AL109976.1-201ENST00000621919 5678 ntBASIC11.97□□□□□ -0.49
SCN2BO60939 PLEKHG6-204ENST00000449001 3111 ntTSL 2 BASIC11.97□□□□□ -0.49
SCN2BO60939 SLC26A2-201ENST00000286298 8080 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SCN2BO60939 SLC4A9-201ENST00000432095 3086 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SCN2BO60939 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SCN2BO60939 CD300LF-202ENST00000326165 1764 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
SCN2BO60939 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC11.97□□□□□ -0.49
SCN2BO60939 LAMB3-202ENST00000367030 3931 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SCN2BO60939 BDNF-215ENST00000530861 3918 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SCN2BO60939 DLC1-210ENST00000512044 3758 ntTSL 2 BASIC11.97□□□□□ -0.49
SCN2BO60939 LYSMD3-204ENST00000509384 1538 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SCN2BO60939 ZNF583-201ENST00000291598 2538 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
SCN2BO60939 FAM118A-201ENST00000216214 3458 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
SCN2BO60939 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SCN2BO60939 DRC1-201ENST00000288710 2491 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
SCN2BO60939 PI4KB-202ENST00000368873 3340 ntTSL 2 BASIC11.97□□□□□ -0.49
SCN2BO60939 SPATA2-202ENST00000422556 4138 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
SCN2BO60939 LILRA5-201ENST00000432233 1363 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
SCN2BO60939 YWHAB-202ENST00000372839 3109 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SCN2BO60939 UBA3-202ENST00000361055 2154 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
SCN2BO60939 AC112176.1-201ENST00000565428 3024 ntBASIC11.97□□□□□ -0.49
SCN2BO60939 TUB-202ENST00000305253 6420 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SCN2BO60939 RNF17-202ENST00000255325 2134 ntTSL 2 BASIC11.97□□□□□ -0.49
SCN2BO60939 DOCK6-201ENST00000294618 6358 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SCN2BO60939 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
SCN2BO60939 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
SCN2BO60939 TOMM5-202ENST00000377773 808 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
SCN2BO60939 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC11.97□□□□□ -0.49
SCN2BO60939 AL358876.2-201ENST00000424689 477 ntTSL 3 BASIC11.97□□□□□ -0.49
SCN2BO60939 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC11.97□□□□□ -0.49
SCN2BO60939 HLA-DPB2-205ENST00000435074 1188 ntBASIC11.97□□□□□ -0.49
SCN2BO60939 AC133141.1-201ENST00000443015 339 ntBASIC11.97□□□□□ -0.49
SCN2BO60939 AL135901.1-201ENST00000451812 333 ntBASIC11.97□□□□□ -0.49
SCN2BO60939 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC11.97□□□□□ -0.49
SCN2BO60939 AC008267.1-201ENST00000474858 1069 ntBASIC11.97□□□□□ -0.49
SCN2BO60939 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC11.97□□□□□ -0.49
SCN2BO60939 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC11.97□□□□□ -0.49
SCN2BO60939 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC11.97□□□□□ -0.49
SCN2BO60939 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC11.97□□□□□ -0.49
SCN2BO60939 CFL1-206ENST00000527344 962 ntTSL 2 BASIC11.97□□□□□ -0.49
SCN2BO60939 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
SCN2BO60939 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC11.97□□□□□ -0.49
SCN2BO60939 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
SCN2BO60939 SRP54-AS1-204ENST00000556705 580 ntTSL 2 BASIC11.97□□□□□ -0.49
SCN2BO60939 MIR5196-201ENST00000578146 115 ntBASIC11.97□□□□□ -0.49
SCN2BO60939 MIR4706-201ENST00000582134 82 ntBASIC11.97□□□□□ -0.49
SCN2BO60939 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC11.97□□□□□ -0.49
SCN2BO60939 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC11.97□□□□□ -0.49
SCN2BO60939 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
SCN2BO60939 AC008622.3-201ENST00000621170 600 ntBASIC11.97□□□□□ -0.49
SCN2BO60939 PLS3-210ENST00000626746 216 ntTSL 4 BASIC11.97□□□□□ -0.49
SCN2BO60939 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC11.97□□□□□ -0.49
SCN2BO60939 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC11.97□□□□□ -0.49
SCN2BO60939 AC099795.2-201ENST00000639582 440 ntBASIC11.97□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms