Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC1A1P43005 DDX11L8-201ENST00000535849 366 ntBASIC13.23□□□□□ -0.29
SLC1A1P43005 AP001150.1-201ENST00000558822 2128 ntTSL 2 BASIC13.23□□□□□ -0.29
SLC1A1P43005 AL590235.1-201ENST00000564650 861 ntBASIC13.23□□□□□ -0.29
SLC1A1P43005 COG4-212ENST00000564653 590 ntTSL 5 BASIC13.23□□□□□ -0.29
SLC1A1P43005 AC127459.2-201ENST00000567395 932 ntTSL 3 BASIC13.23□□□□□ -0.29
SLC1A1P43005 MIR4706-201ENST00000582134 82 ntBASIC13.23□□□□□ -0.29
SLC1A1P43005 FXYD3-211ENST00000604804 564 ntTSL 4 BASIC13.23□□□□□ -0.29
SLC1A1P43005 AL132656.4-201ENST00000623504 2122 ntBASIC13.23□□□□□ -0.29
SLC1A1P43005 OR5L1-201ENST00000625203 1110 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
SLC1A1P43005 LUC7L3-223ENST00000625349 408 ntTSL 2 BASIC13.23□□□□□ -0.29
SLC1A1P43005 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC13.23□□□□□ -0.29
SLC1A1P43005 OR10G3-202ENST00000641040 2533 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
SLC1A1P43005 ASB9-202ENST00000380485 1652 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SLC1A1P43005 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC13.23□□□□□ -0.29
SLC1A1P43005 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
SLC1A1P43005 PRDM7-202ENST00000449207 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC1A1P43005 P4HA1-201ENST00000263556 2844 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC1A1P43005 P4HA1-204ENST00000394890 2844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC1A1P43005 UBXN4-201ENST00000272638 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC1A1P43005 RNF4-222ENST00000541204 2796 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SLC1A1P43005 CPPED1-203ENST00000433677 1993 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SLC1A1P43005 RASSF8-203ENST00000405154 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC1A1P43005 PNP-201ENST00000361505 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC1A1P43005 PRAMEF9-201ENST00000415919 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC1A1P43005 TNFSF13B-202ENST00000430559 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
SLC1A1P43005 EXOC7-205ENST00000405575 2208 ntTSL 5 BASIC13.23□□□□□ -0.29
SLC1A1P43005 NEK6-213ENST00000540326 2578 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
SLC1A1P43005 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC13.23□□□□□ -0.29
SLC1A1P43005 TMEM106A-204ENST00000588659 1437 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SLC1A1P43005 METAP2-209ENST00000550777 1779 ntTSL 5 BASIC13.22□□□□□ -0.29
SLC1A1P43005 PNMA5-201ENST00000361887 3197 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SLC1A1P43005 SLC5A9-203ENST00000438567 3195 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SLC1A1P43005 PRKCG-201ENST00000263431 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SLC1A1P43005 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC13.22□□□□□ -0.29
SLC1A1P43005 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
SLC1A1P43005 TNFAIP3-206ENST00000612899 4735 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
SLC1A1P43005 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SLC1A1P43005 BSCL2-203ENST00000360796 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SLC1A1P43005 COBLL1-202ENST00000375458 9367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SLC1A1P43005 ST5-230ENST00000530438 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SLC1A1P43005 RPS3-209ENST00000527446 1306 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SLC1A1P43005 AC020931.1-201ENST00000589622 1346 ntBASIC13.22□□□□□ -0.29
SLC1A1P43005 AC073488.1-201ENST00000416620 1600 ntBASIC13.22□□□□□ -0.29
SLC1A1P43005 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SLC1A1P43005 VAT1L-201ENST00000302536 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SLC1A1P43005 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SLC1A1P43005 LINC01556-201ENST00000377186 466 ntTSL 2 BASIC13.22□□□□□ -0.29
SLC1A1P43005 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SLC1A1P43005 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SLC1A1P43005 RBMXP1-201ENST00000408004 1191 ntBASIC13.22□□□□□ -0.29
SLC1A1P43005 CTLA4-203ENST00000427473 969 ntTSL 5 BASIC13.22□□□□□ -0.29
SLC1A1P43005 LINC01046-201ENST00000443719 405 ntTSL 3 BASIC13.22□□□□□ -0.29
SLC1A1P43005 RN7SL288P-201ENST00000490496 291 ntBASIC13.22□□□□□ -0.29
SLC1A1P43005 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC13.22□□□□□ -0.29
SLC1A1P43005 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SLC1A1P43005 ZNF226-212ENST00000588795 641 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SLC1A1P43005 AC002472.4-201ENST00000641915 272 ntBASIC13.22□□□□□ -0.29
SLC1A1P43005 PMEL-204ENST00000548493 2204 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
SLC1A1P43005 DYNC1LI1-201ENST00000273130 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SLC1A1P43005 AC005696.4-201ENST00000614400 3147 ntBASIC13.22□□□□□ -0.29
SLC1A1P43005 AC037459.3-201ENST00000521025 2750 ntBASIC13.22□□□□□ -0.29
SLC1A1P43005 PAPLN-208ENST00000555445 4282 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
SLC1A1P43005 ZNF548-201ENST00000336128 2115 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
SLC1A1P43005 REXO5-201ENST00000261377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SLC1A1P43005 DNMBP-201ENST00000324109 6400 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SLC1A1P43005 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
SLC1A1P43005 LINC00664-201ENST00000596203 1742 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SLC1A1P43005 VWA8-203ENST00000379310 7147 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SLC1A1P43005 HMBS-202ENST00000392841 1411 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SLC1A1P43005 PFKM-201ENST00000312352 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SLC1A1P43005 DRC1-201ENST00000288710 2491 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
SLC1A1P43005 HSPA8P7-201ENST00000443628 1948 ntBASIC13.21□□□□□ -0.29
SLC1A1P43005 AL591643.1-201ENST00000561587 1900 ntBASIC13.21□□□□□ -0.29
SLC1A1P43005 SPCS2-209ENST00000610881 2711 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SLC1A1P43005 AL391294.1-201ENST00000641352 4068 ntBASIC13.21□□□□□ -0.29
SLC1A1P43005 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SLC1A1P43005 GRIPAP1-207ENST00000593475 2908 ntTSL 5 BASIC13.21□□□□□ -0.29
SLC1A1P43005 AC073585.1-201ENST00000368895 1328 ntBASIC13.21□□□□□ -0.29
SLC1A1P43005 PLK4-203ENST00000507249 3195 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SLC1A1P43005 ESPNL-206ENST00000612395 3673 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SLC1A1P43005 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
SLC1A1P43005 KYAT3-201ENST00000260508 2070 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
SLC1A1P43005 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC13.21□□□□□ -0.29
SLC1A1P43005 OBSCN-AS1-201ENST00000295012 889 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SLC1A1P43005 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC13.21□□□□□ -0.29
SLC1A1P43005 LY86-202ENST00000379953 1197 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SLC1A1P43005 OR51A9P-201ENST00000422578 911 ntBASIC13.21□□□□□ -0.29
SLC1A1P43005 LINC01678-202ENST00000424921 475 ntTSL 3 BASIC13.21□□□□□ -0.29
SLC1A1P43005 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SLC1A1P43005 AC098649.1-201ENST00000427258 569 ntTSL 4 BASIC13.21□□□□□ -0.29
SLC1A1P43005 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC13.21□□□□□ -0.29
SLC1A1P43005 NEURL1-AS1-202ENST00000453753 640 ntTSL 5 BASIC13.21□□□□□ -0.29
SLC1A1P43005 DMKN-256ENST00000492341 738 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
SLC1A1P43005 SAP30L-AS1-202ENST00000519727 396 ntTSL 3 BASIC13.21□□□□□ -0.29
SLC1A1P43005 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC13.21□□□□□ -0.29
SLC1A1P43005 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC13.21□□□□□ -0.29
SLC1A1P43005 CCND3P2-201ENST00000579393 537 ntBASIC13.21□□□□□ -0.29
SLC1A1P43005 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC13.21□□□□□ -0.29
SLC1A1P43005 AC010632.2-201ENST00000588369 1224 ntBASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms