Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 LAMTOR5-AS1-209ENST00000597455 805 ntBASIC13.23□□□□□ -0.29
MTHFRP42898 AL589843.2-202ENST00000602289 740 ntBASIC13.23□□□□□ -0.29
MTHFRP42898 AC023509.4-201ENST00000602306 775 ntBASIC13.23□□□□□ -0.29
MTHFRP42898 RN7SL238P-201ENST00000613832 290 ntBASIC13.23□□□□□ -0.29
MTHFRP42898 Metazoa_SRP.139-201ENST00000616096 290 ntBASIC13.23□□□□□ -0.29
MTHFRP42898 RN7SL106P-201ENST00000618104 290 ntBASIC13.23□□□□□ -0.29
MTHFRP42898 Metazoa_SRP.97-201ENST00000618280 304 ntBASIC13.23□□□□□ -0.29
MTHFRP42898 LINC02193-207ENST00000621799 723 ntTSL 5 BASIC13.23□□□□□ -0.29
MTHFRP42898 AC069287.1-202ENST00000622626 723 ntTSL 5 BASIC13.23□□□□□ -0.29
MTHFRP42898 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MTHFRP42898 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MTHFRP42898 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MTHFRP42898 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MTHFRP42898 UCK1-202ENST00000372210 2051 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MTHFRP42898 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC13.23□□□□□ -0.29
MTHFRP42898 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MTHFRP42898 KRT36-201ENST00000328119 1644 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
MTHFRP42898 WDSUB1-204ENST00000409124 1600 ntTSL 5 BASIC13.23□□□□□ -0.29
MTHFRP42898 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
MTHFRP42898 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
MTHFRP42898 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
MTHFRP42898 AC136604.2-201ENST00000500262 1966 ntTSL 2 BASIC13.23□□□□□ -0.29
MTHFRP42898 TACC1-208ENST00000520340 1976 ntTSL 5 BASIC13.23□□□□□ -0.29
MTHFRP42898 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MTHFRP42898 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MTHFRP42898 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC13.23□□□□□ -0.29
MTHFRP42898 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MTHFRP42898 ZSCAN5C-202ENST00000534327 1892 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
MTHFRP42898 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
MTHFRP42898 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
MTHFRP42898 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
MTHFRP42898 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MTHFRP42898 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
MTHFRP42898 NUB1-212ENST00000568733 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
MTHFRP42898 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MTHFRP42898 CCRL2-202ENST00000399036 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MTHFRP42898 ZNF621-202ENST00000339296 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MTHFRP42898 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MTHFRP42898 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
MTHFRP42898 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
MTHFRP42898 SLC25A17-217ENST00000544408 2060 ntTSL 2 BASIC13.22□□□□□ -0.29
MTHFRP42898 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
MTHFRP42898 AC240565.1-201ENST00000624936 1373 ntTSL 5 BASIC13.22□□□□□ -0.29
MTHFRP42898 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MTHFRP42898 TTC39B-201ENST00000297615 3053 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
MTHFRP42898 MYADM-204ENST00000391770 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MTHFRP42898 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
MTHFRP42898 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
MTHFRP42898 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
MTHFRP42898 FBXO39-201ENST00000321535 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MTHFRP42898 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
MTHFRP42898 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MTHFRP42898 PAX8-203ENST00000348715 3966 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MTHFRP42898 AL627309.3-201ENST00000495576 1319 ntTSL 5 BASIC13.22□□□□□ -0.29
MTHFRP42898 METTL22-203ENST00000561758 1312 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
MTHFRP42898 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC13.22□□□□□ -0.29
MTHFRP42898 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MTHFRP42898 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MTHFRP42898 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
MTHFRP42898 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MTHFRP42898 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC13.22□□□□□ -0.29
MTHFRP42898 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MTHFRP42898 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC13.22□□□□□ -0.29
MTHFRP42898 SIRT4-201ENST00000202967 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MTHFRP42898 COX6B1-201ENST00000246554 667 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MTHFRP42898 FAM204A-202ENST00000369172 872 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
MTHFRP42898 TCEAL1-201ENST00000372624 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MTHFRP42898 AL391987.4-201ENST00000377547 439 ntTSL 3 BASIC13.22□□□□□ -0.29
MTHFRP42898 PDCD4-AS1-201ENST00000420367 778 ntTSL 2 BASIC13.22□□□□□ -0.29
MTHFRP42898 U62317.1-201ENST00000434237 157 ntTSL 3 BASIC13.22□□□□□ -0.29
MTHFRP42898 AL445933.2-201ENST00000440249 265 ntTSL 2 BASIC13.22□□□□□ -0.29
MTHFRP42898 AC118553.1-201ENST00000454219 655 ntTSL 2 BASIC13.22□□□□□ -0.29
MTHFRP42898 AC091893.1-201ENST00000503772 399 ntBASIC13.22□□□□□ -0.29
MTHFRP42898 TMEM161B-AS1-204ENST00000504636 1039 ntTSL 2 BASIC13.22□□□□□ -0.29
MTHFRP42898 AP003469.2-201ENST00000524369 430 ntTSL 3 BASIC13.22□□□□□ -0.29
MTHFRP42898 TRAPPC4-209ENST00000528230 583 ntTSL 3 BASIC13.22□□□□□ -0.29
MTHFRP42898 KIAA1191-211ENST00000533553 560 ntTSL 3 BASIC13.22□□□□□ -0.29
MTHFRP42898 AC074052.1-201ENST00000567734 456 ntBASIC13.22□□□□□ -0.29
MTHFRP42898 AFMID-205ENST00000586731 550 ntTSL 3 BASIC13.22□□□□□ -0.29
MTHFRP42898 AFMID-210ENST00000589256 578 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MTHFRP42898 AC007728.3-201ENST00000602304 746 ntBASIC13.22□□□□□ -0.29
MTHFRP42898 AL356423.1-201ENST00000604953 538 ntBASIC13.22□□□□□ -0.29
MTHFRP42898 ZEB1-AS1-207ENST00000606286 476 ntTSL 4 BASIC13.22□□□□□ -0.29
MTHFRP42898 LINC01206-212ENST00000609168 988 ntTSL 5 BASIC13.22□□□□□ -0.29
MTHFRP42898 IPO7-208ENST00000630083 195 ntTSL 5 BASIC13.22□□□□□ -0.29
MTHFRP42898 AC083841.4-201ENST00000637396 352 ntBASIC13.22□□□□□ -0.29
MTHFRP42898 CARS-216ENST00000639317 135 ntTSL 5 BASIC13.22□□□□□ -0.29
MTHFRP42898 BIVM-202ENST00000448849 3198 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MTHFRP42898 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
MTHFRP42898 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MTHFRP42898 DNAJC30-201ENST00000395176 2485 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
MTHFRP42898 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
MTHFRP42898 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
MTHFRP42898 MRPL48-201ENST00000310614 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MTHFRP42898 ELP4-225ENST00000640533 1801 ntTSL 5 BASIC13.22□□□□□ -0.29
MTHFRP42898 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MTHFRP42898 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MTHFRP42898 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
MTHFRP42898 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
MTHFRP42898 LINC00343-203ENST00000454555 1765 ntTSL 2 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms