Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 TRIP12-205ENST00000409677 1507 ntTSL 2 BASIC12.03□□□□□ -0.48
SCN2BO60939 PLEKHG5-202ENST00000377725 3475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCN2BO60939 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCN2BO60939 IQCF1-201ENST00000310914 695 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCN2BO60939 SIRPB3P-201ENST00000340424 1216 ntBASIC12.03□□□□□ -0.48
SCN2BO60939 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCN2BO60939 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SCN2BO60939 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC12.03□□□□□ -0.48
SCN2BO60939 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC12.03□□□□□ -0.48
SCN2BO60939 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC12.03□□□□□ -0.48
SCN2BO60939 KRT18P46-201ENST00000435568 1279 ntBASIC12.03□□□□□ -0.48
SCN2BO60939 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC12.03□□□□□ -0.48
SCN2BO60939 TMEM107-205ENST00000449985 1210 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SCN2BO60939 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC12.03□□□□□ -0.48
SCN2BO60939 HNRNPA1P4-201ENST00000509706 756 ntBASIC12.03□□□□□ -0.48
SCN2BO60939 IGHV3-37-201ENST00000518544 340 ntBASIC12.03□□□□□ -0.48
SCN2BO60939 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCN2BO60939 IFI27L1-209ENST00000555523 680 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SCN2BO60939 AL137028.1-201ENST00000620521 555 ntBASIC12.03□□□□□ -0.48
SCN2BO60939 MIR6746-201ENST00000620971 63 ntBASIC12.03□□□□□ -0.48
SCN2BO60939 AC011471.3-201ENST00000623576 402 ntBASIC12.03□□□□□ -0.48
SCN2BO60939 AL451007.2-201ENST00000632004 563 ntBASIC12.03□□□□□ -0.48
SCN2BO60939 AL590094.1-206ENST00000635959 478 ntTSL 5 BASIC12.03□□□□□ -0.48
SCN2BO60939 AL590094.1-209ENST00000637260 499 ntTSL 5 BASIC12.03□□□□□ -0.48
SCN2BO60939 NQO2-205ENST00000380455 10084 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCN2BO60939 SOX13-203ENST00000367204 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCN2BO60939 GIMAP4-202ENST00000461940 1569 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
SCN2BO60939 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCN2BO60939 BCKDK-204ENST00000394951 2164 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SCN2BO60939 PACRG-AS1-201ENST00000626335 2192 ntTSL 2 BASIC12.03□□□□□ -0.48
SCN2BO60939 AC135050.1-201ENST00000622229 3380 ntTSL 2 BASIC12.03□□□□□ -0.48
SCN2BO60939 GSTA2-201ENST00000493422 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCN2BO60939 MATN2-218ENST00000524308 3449 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SCN2BO60939 ATAD2-201ENST00000287394 5565 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCN2BO60939 PLK4-203ENST00000507249 3195 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SCN2BO60939 AC002550.1-201ENST00000565916 1379 ntTSL 5 BASIC12.03□□□□□ -0.48
SCN2BO60939 WDR47-203ENST00000369962 4199 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCN2BO60939 RBMX-201ENST00000320676 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCN2BO60939 LPGAT1-201ENST00000366996 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCN2BO60939 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC12.03□□□□□ -0.48
SCN2BO60939 ERP44-201ENST00000262455 4854 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCN2BO60939 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCN2BO60939 ANKRD27-204ENST00000587352 3301 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SCN2BO60939 MYH11-202ENST00000396324 6847 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SCN2BO60939 SEMA6D-206ENST00000389428 5874 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SCN2BO60939 PKP2-202ENST00000340811 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SCN2BO60939 BARD1-212ENST00000617164 5449 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SCN2BO60939 MRPL48-201ENST00000310614 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SCN2BO60939 PMEL-204ENST00000548493 2204 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.48
SCN2BO60939 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
SCN2BO60939 NTRK2-208ENST00000395882 7111 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SCN2BO60939 ZKSCAN3-201ENST00000252211 4725 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SCN2BO60939 AK7-201ENST00000267584 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SCN2BO60939 RPS6KA2-203ENST00000405189 2282 ntTSL 2 BASIC12.02□□□□□ -0.49
SCN2BO60939 PIMREG-206ENST00000572595 1551 ntTSL 3 BASIC12.02□□□□□ -0.49
SCN2BO60939 CSPG4P13-202ENST00000567704 4801 ntBASIC12.02□□□□□ -0.49
SCN2BO60939 ENDOU-201ENST00000229003 2332 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SCN2BO60939 LINC01429-201ENST00000438154 2326 ntTSL 2 BASIC12.02□□□□□ -0.49
SCN2BO60939 FAN1-201ENST00000362065 4891 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SCN2BO60939 NAT10-202ENST00000527971 1600 ntTSL 2 BASIC12.02□□□□□ -0.49
SCN2BO60939 CAPN1-208ENST00000527323 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SCN2BO60939 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SCN2BO60939 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SCN2BO60939 OR2T8-201ENST00000319968 939 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
SCN2BO60939 EDDM3B-201ENST00000326783 896 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SCN2BO60939 PEA15-203ENST00000368077 1021 ntTSL 2 BASIC12.02□□□□□ -0.49
SCN2BO60939 SURF4-203ENST00000371991 715 ntTSL 3 BASIC12.02□□□□□ -0.49
SCN2BO60939 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC12.02□□□□□ -0.49
SCN2BO60939 GEMIN8P4-201ENST00000380526 729 ntBASIC12.02□□□□□ -0.49
SCN2BO60939 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC12.02□□□□□ -0.49
SCN2BO60939 AL512599.1-201ENST00000430724 685 ntBASIC12.02□□□□□ -0.49
SCN2BO60939 PRKRIP1-202ENST00000462601 884 ntTSL 2 BASIC12.02□□□□□ -0.49
SCN2BO60939 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC12.02□□□□□ -0.49
SCN2BO60939 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC12.02□□□□□ -0.49
SCN2BO60939 ALG1L3P-201ENST00000503331 765 ntBASIC12.02□□□□□ -0.49
SCN2BO60939 AC093909.3-201ENST00000504783 336 ntBASIC12.02□□□□□ -0.49
SCN2BO60939 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SCN2BO60939 AC080023.2-201ENST00000532615 208 ntBASIC12.02□□□□□ -0.49
SCN2BO60939 AC069503.1-201ENST00000538710 816 ntTSL 2 BASIC12.02□□□□□ -0.49
SCN2BO60939 AC078814.4-201ENST00000546650 327 ntBASIC12.02□□□□□ -0.49
SCN2BO60939 AC025259.1-201ENST00000550301 647 ntTSL 3 BASIC12.02□□□□□ -0.49
SCN2BO60939 DUT-207ENST00000559416 635 ntTSL 2 BASIC12.02□□□□□ -0.49
SCN2BO60939 NPLOC4-214ENST00000573876 560 ntTSL 4 BASIC12.02□□□□□ -0.49
SCN2BO60939 KRT8P34-201ENST00000577607 1044 ntBASIC12.02□□□□□ -0.49
SCN2BO60939 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC12.02□□□□□ -0.49
SCN2BO60939 AC005332.2-201ENST00000590010 930 ntBASIC12.02□□□□□ -0.49
SCN2BO60939 AC123912.6-201ENST00000612657 315 ntBASIC12.02□□□□□ -0.49
SCN2BO60939 WT1-AS_6.1-201ENST00000614919 121 ntBASIC12.02□□□□□ -0.49
SCN2BO60939 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC12.02□□□□□ -0.49
SCN2BO60939 AC010531.8-201ENST00000623341 685 ntBASIC12.02□□□□□ -0.49
SCN2BO60939 OR2T8-202ENST00000641945 1226 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
SCN2BO60939 GAS7-219ENST00000585266 3535 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SCN2BO60939 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SCN2BO60939 HKR1-204ENST00000544914 2854 ntTSL 2 BASIC12.02□□□□□ -0.49
SCN2BO60939 AL031590.1-202ENST00000641466 1737 ntBASIC12.02□□□□□ -0.49
SCN2BO60939 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SCN2BO60939 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SCN2BO60939 WASH7P-201ENST00000488147 1351 ntBASIC12.02□□□□□ -0.49
SCN2BO60939 PLEKHG4-202ENST00000379344 4513 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
SCN2BO60939 CACNA1C-AS1-201ENST00000501371 2191 ntTSL 2 BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms