Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 AGPAT3-202ENST00000327505 3589 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 AGPAT3-204ENST00000398061 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 LRRC8A-201ENST00000259324 4619 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 DNPEP-205ENST00000373972 1578 ntTSL 2 BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 BTN2A2-204ENST00000432533 1570 ntTSL 2 BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 PCDHB7-201ENST00000231137 3765 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 YLPM1-201ENST00000325680 7108 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 HTR3D-202ENST00000382489 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 LILRA2-204ENST00000391738 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 TBC1D3I-201ENST00000616671 1982 ntTSL 5 BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 AP003063.2-201ENST00000525984 2067 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 HEBP1-203ENST00000536942 2056 ntTSL 2 BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 TMEM170A-201ENST00000357613 4959 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 HAS3-202ENST00000306560 4220 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 CCDC144A-204ENST00000360524 5830 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
NPIPA3F8WFD2 EPB41L5-201ENST00000263713 6628 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 CASC4P1-201ENST00000456608 1312 ntBASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 DPY19L1-201ENST00000310974 4870 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 RNF214-205ENST00000531287 1706 ntTSL 2 BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 GEMIN5-201ENST00000285873 5397 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 LINC02140-202ENST00000566649 2017 ntTSL 2 BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 ATCAY-205ENST00000600960 2904 ntTSL 5 BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 UBOX5-202ENST00000348031 4469 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 AC092117.1-201ENST00000621230 3250 ntBASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 VAMP7-201ENST00000262640 2496 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 ALOX5-207ENST00000542434 2390 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 TSFM-204ENST00000454289 2192 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 CDC25C-202ENST00000348983 1951 ntTSL 5 BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 NDEL1-203ENST00000402554 1858 ntTSL 5 BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 AL512488.1-201ENST00000433544 1671 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 ZNF101-203ENST00000415784 1552 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 PCDHB4-201ENST00000194152 3825 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 IL37-204ENST00000352179 709 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 TOMM5-202ENST00000377773 808 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 KRTAP10-10-201ENST00000380095 1100 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 IGHV1-45-201ENST00000390621 411 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 LINC01885-201ENST00000414300 609 ntTSL 4 BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 AC002451.1-202ENST00000432265 771 ntTSL 2 BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 AC098934.2-202ENST00000438944 1033 ntBASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 AL365203.1-201ENST00000450890 1048 ntTSL 3 BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 AC109466.1-201ENST00000517508 804 ntTSL 4 BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 DERL1-204ENST00000519018 575 ntTSL 4 BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 LINC02427-202ENST00000605270 1059 ntTSL 2 BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 AC108102.1-201ENST00000606528 548 ntTSL 3 BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 AC021072.1-201ENST00000635789 835 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 AC092028.1-202ENST00000641483 3547 ntBASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 AC092028.1-201ENST00000641781 3540 ntBASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 ELN-205ENST00000358929 3967 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 SNHG14-218ENST00000553108 2208 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 EPB41L2-205ENST00000445890 3677 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 OLFML1-204ENST00000530135 1620 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 PNMA3-203ENST00000619635 3627 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 FAM160A1-201ENST00000435205 4576 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 PKMP1-201ENST00000455804 1523 ntBASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 VWA3B-221ENST00000614454 1542 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 CEP68-201ENST00000260569 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 TRPC3-205ENST00000513531 2382 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 DNASE1L3-207ENST00000486455 1321 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 AC109326.1-201ENST00000624705 1321 ntBASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 ALPL-203ENST00000374832 2193 ntAPPRIS P3 TSL 2 BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 ERVK13-1-205ENST00000568395 5578 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
NPIPA3F8WFD2 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
NPIPA3F8WFD2 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC11.59□□□□□ -0.55
NPIPA3F8WFD2 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
NPIPA3F8WFD2 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC11.59□□□□□ -0.55
NPIPA3F8WFD2 MIEF1-201ENST00000325301 5625 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NPIPA3F8WFD2 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
NPIPA3F8WFD2 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
NPIPA3F8WFD2 COL22A1-203ENST00000435777 4355 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms