Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AGO2-205ENST00000519980 3141 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SLC1A1P43005 TSPEAR-AS2-201ENST00000330490 823 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SLC1A1P43005 NR0B1-201ENST00000378963 475 ntTSL 2 BASIC13.28□□□□□ -0.28
SLC1A1P43005 CRYBB2-201ENST00000398215 886 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SLC1A1P43005 AL356417.1-201ENST00000421161 845 ntTSL 3 BASIC13.28□□□□□ -0.28
SLC1A1P43005 BCAS2P2-201ENST00000425064 674 ntBASIC13.28□□□□□ -0.28
SLC1A1P43005 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC13.28□□□□□ -0.28
SLC1A1P43005 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC13.28□□□□□ -0.28
SLC1A1P43005 CYP2F2P-201ENST00000437853 1056 ntBASIC13.28□□□□□ -0.28
SLC1A1P43005 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
SLC1A1P43005 PSMD6-209ENST00000482510 1176 ntTSL 5 BASIC13.28□□□□□ -0.28
SLC1A1P43005 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC13.28□□□□□ -0.28
SLC1A1P43005 ZNF576-204ENST00000528387 859 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
SLC1A1P43005 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC13.28□□□□□ -0.28
SLC1A1P43005 AC023051.2-201ENST00000541141 460 ntBASIC13.28□□□□□ -0.28
SLC1A1P43005 AC063924.1-201ENST00000546680 673 ntBASIC13.28□□□□□ -0.28
SLC1A1P43005 IL32-230ENST00000551122 733 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
SLC1A1P43005 AC012615.6-203ENST00000590531 272 ntTSL 2 BASIC13.28□□□□□ -0.28
SLC1A1P43005 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC13.28□□□□□ -0.28
SLC1A1P43005 AP001065.2-201ENST00000617205 644 ntBASIC13.28□□□□□ -0.28
SLC1A1P43005 LINC00923-208ENST00000621777 503 ntTSL 5 BASIC13.28□□□□□ -0.28
SLC1A1P43005 LINC00431-202ENST00000636375 159 ntBASIC13.28□□□□□ -0.28
SLC1A1P43005 AC139713.2-207ENST00000641556 1292 ntBASIC13.28□□□□□ -0.28
SLC1A1P43005 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SLC1A1P43005 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SLC1A1P43005 PALM2-201ENST00000314527 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SLC1A1P43005 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SLC1A1P43005 PCDHGA4-202ENST00000612927 2691 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
SLC1A1P43005 RPS6KC1-209ENST00000615329 4022 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SLC1A1P43005 RBMX-201ENST00000320676 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SLC1A1P43005 OTOA-203ENST00000388957 2703 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
SLC1A1P43005 POLL-203ENST00000370162 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SLC1A1P43005 NT5E-201ENST00000257770 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SLC1A1P43005 SMCR5-201ENST00000543475 2844 ntBASIC13.28□□□□□ -0.28
SLC1A1P43005 GRHL3-202ENST00000350501 2119 ntTSL 2 BASIC13.28□□□□□ -0.28
SLC1A1P43005 LRRC63-202ENST00000446175 2114 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
SLC1A1P43005 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC13.28□□□□□ -0.28
SLC1A1P43005 NMT2-202ENST00000378165 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SLC1A1P43005 PMEPA1-205ENST00000395816 4519 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SLC1A1P43005 PATJ-215ENST00000635137 2298 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SLC1A1P43005 ACVR1C-202ENST00000335450 1501 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SLC1A1P43005 WDR78-201ENST00000371022 1520 ntTSL 5 BASIC13.28□□□□□ -0.28
SLC1A1P43005 ENDOU-201ENST00000229003 2332 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SLC1A1P43005 PPP3CB-204ENST00000394829 3149 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
SLC1A1P43005 PAX6-217ENST00000481563 1587 ntTSL 5 BASIC13.28□□□□□ -0.28
SLC1A1P43005 TTC39B-202ENST00000380850 3221 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
SLC1A1P43005 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC13.27□□□□□ -0.28
SLC1A1P43005 COL11A1-210ENST00000512756 5442 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SLC1A1P43005 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC13.27□□□□□ -0.28
SLC1A1P43005 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC13.27□□□□□ -0.28
SLC1A1P43005 CDKN2B-201ENST00000276925 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SLC1A1P43005 GTF2IP20-203ENST00000634905 2966 ntTSL 5 BASIC13.27□□□□□ -0.28
SLC1A1P43005 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SLC1A1P43005 USP33-204ENST00000370794 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SLC1A1P43005 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
SLC1A1P43005 MGLL-205ENST00000453507 4552 ntTSL 2 BASIC13.27□□□□□ -0.28
SLC1A1P43005 TLE3-213ENST00000558379 2304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SLC1A1P43005 KLB-201ENST00000257408 6082 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SLC1A1P43005 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SLC1A1P43005 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SLC1A1P43005 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC13.27□□□□□ -0.29
SLC1A1P43005 AC025822.1-201ENST00000455525 633 ntTSL 2 BASIC13.27□□□□□ -0.29
SLC1A1P43005 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC13.27□□□□□ -0.29
SLC1A1P43005 AC008267.1-201ENST00000474858 1069 ntBASIC13.27□□□□□ -0.29
SLC1A1P43005 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC13.27□□□□□ -0.29
SLC1A1P43005 ALG1L6P-201ENST00000515248 758 ntBASIC13.27□□□□□ -0.29
SLC1A1P43005 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SLC1A1P43005 CFL1-206ENST00000527344 962 ntTSL 2 BASIC13.27□□□□□ -0.29
SLC1A1P43005 AP001102.1-201ENST00000528959 409 ntBASIC13.27□□□□□ -0.29
SLC1A1P43005 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC13.27□□□□□ -0.29
SLC1A1P43005 MYL6-218ENST00000550697 901 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SLC1A1P43005 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC13.27□□□□□ -0.29
SLC1A1P43005 AC108673.2-201ENST00000608909 565 ntBASIC13.27□□□□□ -0.29
SLC1A1P43005 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SLC1A1P43005 GGPS1-202ENST00000358966 2740 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
SLC1A1P43005 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC13.27□□□□□ -0.29
SLC1A1P43005 AC002550.1-201ENST00000565916 1379 ntTSL 5 BASIC13.27□□□□□ -0.29
SLC1A1P43005 MESD-206ENST00000561312 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SLC1A1P43005 CDNF-202ENST00000378442 1492 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SLC1A1P43005 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC13.27□□□□□ -0.29
SLC1A1P43005 SLC39A14-204ENST00000381237 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SLC1A1P43005 RCAN2-202ENST00000330430 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SLC1A1P43005 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SLC1A1P43005 VDR-202ENST00000395324 4762 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
SLC1A1P43005 FAM102A-202ENST00000373084 3352 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SLC1A1P43005 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SLC1A1P43005 GPALPP1-202ENST00000361121 3410 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
SLC1A1P43005 SMG8-202ENST00000543872 3477 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
SLC1A1P43005 AC006001.3-201ENST00000449307 7092 ntTSL 3 BASIC13.27□□□□□ -0.29
SLC1A1P43005 SERPIND1-202ENST00000406799 1798 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SLC1A1P43005 DIO1-202ENST00000361921 1861 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
SLC1A1P43005 AL118508.3-201ENST00000623468 1854 ntBASIC13.27□□□□□ -0.29
SLC1A1P43005 LIFR-AS1-201ENST00000500733 3803 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SLC1A1P43005 AOC3-206ENST00000613571 3900 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SLC1A1P43005 C9orf64-201ENST00000314700 2067 ntTSL 2 BASIC13.27□□□□□ -0.29
SLC1A1P43005 RPS6KA2-203ENST00000405189 2282 ntTSL 2 BASIC13.27□□□□□ -0.29
SLC1A1P43005 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SLC1A1P43005 DCK-204ENST00000504952 2614 ntTSL 3 BASIC13.26□□□□□ -0.29
SLC1A1P43005 WDR24-202ENST00000293883 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLC1A1P43005 AC073335.2-201ENST00000610177 3441 ntBASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms