Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC17.43■□□□□ 0.38
LSM4Q9Y4Z0 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LSM4Q9Y4Z0 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC17.43■□□□□ 0.38
LSM4Q9Y4Z0 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.43■□□□□ 0.38
LSM4Q9Y4Z0 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LSM4Q9Y4Z0 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
LSM4Q9Y4Z0 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LSM4Q9Y4Z0 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
LSM4Q9Y4Z0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
LSM4Q9Y4Z0 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
LSM4Q9Y4Z0 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LSM4Q9Y4Z0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LSM4Q9Y4Z0 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC17.42■□□□□ 0.38
LSM4Q9Y4Z0 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.42■□□□□ 0.38
LSM4Q9Y4Z0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC17.42■□□□□ 0.38
LSM4Q9Y4Z0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LSM4Q9Y4Z0 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LSM4Q9Y4Z0 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LSM4Q9Y4Z0 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LSM4Q9Y4Z0 AC144652.1-201ENST00000609974 1624 ntBASIC17.42■□□□□ 0.38
LSM4Q9Y4Z0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
LSM4Q9Y4Z0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC17.41■□□□□ 0.38
LSM4Q9Y4Z0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
LSM4Q9Y4Z0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
LSM4Q9Y4Z0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.41■□□□□ 0.38
LSM4Q9Y4Z0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LSM4Q9Y4Z0 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.41■□□□□ 0.38
LSM4Q9Y4Z0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC17.41■□□□□ 0.38
LSM4Q9Y4Z0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LSM4Q9Y4Z0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
LSM4Q9Y4Z0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC17.41■□□□□ 0.38
LSM4Q9Y4Z0 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LSM4Q9Y4Z0 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LSM4Q9Y4Z0 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LSM4Q9Y4Z0 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LSM4Q9Y4Z0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LSM4Q9Y4Z0 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.4■□□□□ 0.38
LSM4Q9Y4Z0 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.4■□□□□ 0.38
LSM4Q9Y4Z0 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LSM4Q9Y4Z0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
LSM4Q9Y4Z0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LSM4Q9Y4Z0 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LSM4Q9Y4Z0 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LSM4Q9Y4Z0 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LSM4Q9Y4Z0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LSM4Q9Y4Z0 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
LSM4Q9Y4Z0 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC17.39■□□□□ 0.37
LSM4Q9Y4Z0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.39■□□□□ 0.37
LSM4Q9Y4Z0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.39■□□□□ 0.37
LSM4Q9Y4Z0 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LSM4Q9Y4Z0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LSM4Q9Y4Z0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LSM4Q9Y4Z0 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
LSM4Q9Y4Z0 AC106739.1-201ENST00000617035 715 ntBASIC17.39■□□□□ 0.37
LSM4Q9Y4Z0 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC17.39■□□□□ 0.37
LSM4Q9Y4Z0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LSM4Q9Y4Z0 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LSM4Q9Y4Z0 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LSM4Q9Y4Z0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
LSM4Q9Y4Z0 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LSM4Q9Y4Z0 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
LSM4Q9Y4Z0 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LSM4Q9Y4Z0 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
LSM4Q9Y4Z0 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.38■□□□□ 0.37
LSM4Q9Y4Z0 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC17.38■□□□□ 0.37
LSM4Q9Y4Z0 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
LSM4Q9Y4Z0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LSM4Q9Y4Z0 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LSM4Q9Y4Z0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
LSM4Q9Y4Z0 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.38■□□□□ 0.37
LSM4Q9Y4Z0 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LSM4Q9Y4Z0 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LSM4Q9Y4Z0 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LSM4Q9Y4Z0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LSM4Q9Y4Z0 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.38■□□□□ 0.37
LSM4Q9Y4Z0 AC026310.3-201ENST00000625186 2373 ntBASIC17.38■□□□□ 0.37
LSM4Q9Y4Z0 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LSM4Q9Y4Z0 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LSM4Q9Y4Z0 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LSM4Q9Y4Z0 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.37■□□□□ 0.37
LSM4Q9Y4Z0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
LSM4Q9Y4Z0 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.37■□□□□ 0.37
LSM4Q9Y4Z0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17.37■□□□□ 0.37
LSM4Q9Y4Z0 MIR6722-201ENST00000617286 78 ntBASIC17.37■□□□□ 0.37
LSM4Q9Y4Z0 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LSM4Q9Y4Z0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
LSM4Q9Y4Z0 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.37■□□□□ 0.37
LSM4Q9Y4Z0 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LSM4Q9Y4Z0 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LSM4Q9Y4Z0 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LSM4Q9Y4Z0 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LSM4Q9Y4Z0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSM4Q9Y4Z0 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LSM4Q9Y4Z0 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LSM4Q9Y4Z0 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LSM4Q9Y4Z0 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSM4Q9Y4Z0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC17.36■□□□□ 0.37
LSM4Q9Y4Z0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.36■□□□□ 0.37
LSM4Q9Y4Z0 PBX2P1-201ENST00000493219 1291 ntBASIC17.36■□□□□ 0.37
LSM4Q9Y4Z0 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms