Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC28.76■■■□□ 2.19
SPG7Q9UQ90 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC28.76■■■□□ 2.19
SPG7Q9UQ90 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
SPG7Q9UQ90 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC28.76■■■□□ 2.19
SPG7Q9UQ90 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC28.76■■■□□ 2.19
SPG7Q9UQ90 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC28.75■■■□□ 2.19
SPG7Q9UQ90 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC28.75■■■□□ 2.19
SPG7Q9UQ90 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC28.75■■■□□ 2.19
SPG7Q9UQ90 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC28.75■■■□□ 2.19
SPG7Q9UQ90 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
SPG7Q9UQ90 ASL-203ENST00000380839 1765 ntTSL 5 BASIC28.75■■■□□ 2.19
SPG7Q9UQ90 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
SPG7Q9UQ90 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC28.74■■■□□ 2.19
SPG7Q9UQ90 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC28.74■■■□□ 2.19
SPG7Q9UQ90 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC28.74■■■□□ 2.19
SPG7Q9UQ90 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC28.74■■■□□ 2.19
SPG7Q9UQ90 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC28.74■■■□□ 2.19
SPG7Q9UQ90 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC28.74■■■□□ 2.19
SPG7Q9UQ90 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC28.74■■■□□ 2.19
SPG7Q9UQ90 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
SPG7Q9UQ90 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
SPG7Q9UQ90 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
SPG7Q9UQ90 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
SPG7Q9UQ90 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC28.73■■■□□ 2.19
SPG7Q9UQ90 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
SPG7Q9UQ90 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC28.73■■■□□ 2.19
SPG7Q9UQ90 KRT18P11-201ENST00000435214 1283 ntBASIC28.73■■■□□ 2.19
SPG7Q9UQ90 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
SPG7Q9UQ90 PPP1R14BP3-201ENST00000509033 445 ntBASIC28.73■■■□□ 2.19
SPG7Q9UQ90 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
SPG7Q9UQ90 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC28.72■■■□□ 2.19
SPG7Q9UQ90 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC28.72■■■□□ 2.19
SPG7Q9UQ90 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
SPG7Q9UQ90 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
SPG7Q9UQ90 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
SPG7Q9UQ90 ESRRAP2-201ENST00000418437 1549 ntBASIC28.72■■■□□ 2.19
SPG7Q9UQ90 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC28.72■■■□□ 2.19
SPG7Q9UQ90 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC28.72■■■□□ 2.19
SPG7Q9UQ90 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC28.72■■■□□ 2.19
SPG7Q9UQ90 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
SPG7Q9UQ90 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC28.71■■■□□ 2.19
SPG7Q9UQ90 DUSP8P3-201ENST00000399571 1760 ntBASIC28.71■■■□□ 2.19
SPG7Q9UQ90 METTL26-203ENST00000397664 604 ntTSL 2 BASIC28.71■■■□□ 2.19
SPG7Q9UQ90 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC28.71■■■□□ 2.19
SPG7Q9UQ90 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC28.71■■■□□ 2.19
SPG7Q9UQ90 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC28.71■■■□□ 2.19
SPG7Q9UQ90 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
SPG7Q9UQ90 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
SPG7Q9UQ90 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC28.7■■■□□ 2.19
SPG7Q9UQ90 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
SPG7Q9UQ90 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
SPG7Q9UQ90 SPI1-203ENST00000533030 661 ntTSL 2 BASIC28.7■■■□□ 2.18
SPG7Q9UQ90 AC011767.1-201ENST00000617410 1153 ntBASIC28.7■■■□□ 2.18
SPG7Q9UQ90 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC28.7■■■□□ 2.18
SPG7Q9UQ90 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
SPG7Q9UQ90 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SPG7Q9UQ90 CROCCP5-201ENST00000436658 830 ntBASIC28.69■■■□□ 2.18
SPG7Q9UQ90 MAP2K4P1-201ENST00000438453 1195 ntBASIC28.69■■■□□ 2.18
SPG7Q9UQ90 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC28.69■■■□□ 2.18
SPG7Q9UQ90 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC28.69■■■□□ 2.18
SPG7Q9UQ90 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
SPG7Q9UQ90 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC28.69■■■□□ 2.18
SPG7Q9UQ90 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC28.69■■■□□ 2.18
SPG7Q9UQ90 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC28.69■■■□□ 2.18
SPG7Q9UQ90 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC28.69■■■□□ 2.18
SPG7Q9UQ90 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SPG7Q9UQ90 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SPG7Q9UQ90 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
SPG7Q9UQ90 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SPG7Q9UQ90 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SPG7Q9UQ90 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
SPG7Q9UQ90 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
SPG7Q9UQ90 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC28.68■■■□□ 2.18
SPG7Q9UQ90 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
SPG7Q9UQ90 AC006970.2-201ENST00000450065 779 ntBASIC28.68■■■□□ 2.18
SPG7Q9UQ90 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC28.68■■■□□ 2.18
SPG7Q9UQ90 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC28.68■■■□□ 2.18
SPG7Q9UQ90 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SPG7Q9UQ90 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
SPG7Q9UQ90 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC28.67■■■□□ 2.18
SPG7Q9UQ90 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
SPG7Q9UQ90 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
SPG7Q9UQ90 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC28.67■■■□□ 2.18
SPG7Q9UQ90 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
SPG7Q9UQ90 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC28.67■■■□□ 2.18
SPG7Q9UQ90 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SPG7Q9UQ90 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SPG7Q9UQ90 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SPG7Q9UQ90 AC104771.1-201ENST00000603335 964 ntBASIC28.67■■■□□ 2.18
SPG7Q9UQ90 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
SPG7Q9UQ90 AC005224.4-201ENST00000583262 1652 ntBASIC28.67■■■□□ 2.18
SPG7Q9UQ90 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SPG7Q9UQ90 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC28.66■■■□□ 2.18
SPG7Q9UQ90 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SPG7Q9UQ90 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC28.66■■■□□ 2.18
SPG7Q9UQ90 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SPG7Q9UQ90 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC28.66■■■□□ 2.18
SPG7Q9UQ90 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SPG7Q9UQ90 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SPG7Q9UQ90 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC28.66■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms