Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.63■□□□□ 0.89
LHX6Q9UPM6 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.63■□□□□ 0.89
LHX6Q9UPM6 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LHX6Q9UPM6 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LHX6Q9UPM6 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
LHX6Q9UPM6 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
LHX6Q9UPM6 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
LHX6Q9UPM6 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LHX6Q9UPM6 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LHX6Q9UPM6 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LHX6Q9UPM6 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LHX6Q9UPM6 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LHX6Q9UPM6 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LHX6Q9UPM6 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.62■□□□□ 0.89
LHX6Q9UPM6 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.62■□□□□ 0.89
LHX6Q9UPM6 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.62■□□□□ 0.89
LHX6Q9UPM6 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.62■□□□□ 0.89
LHX6Q9UPM6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.62■□□□□ 0.89
LHX6Q9UPM6 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC20.62■□□□□ 0.89
LHX6Q9UPM6 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.62■□□□□ 0.89
LHX6Q9UPM6 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
LHX6Q9UPM6 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LHX6Q9UPM6 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
LHX6Q9UPM6 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LHX6Q9UPM6 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.61■□□□□ 0.89
LHX6Q9UPM6 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
LHX6Q9UPM6 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
LHX6Q9UPM6 AL161729.1-201ENST00000604104 1402 ntBASIC20.61■□□□□ 0.89
LHX6Q9UPM6 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LHX6Q9UPM6 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
LHX6Q9UPM6 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
LHX6Q9UPM6 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
LHX6Q9UPM6 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
LHX6Q9UPM6 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LHX6Q9UPM6 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LHX6Q9UPM6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC20.6■□□□□ 0.89
LHX6Q9UPM6 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.6■□□□□ 0.89
LHX6Q9UPM6 AC105036.2-201ENST00000569468 176 ntBASIC20.6■□□□□ 0.89
LHX6Q9UPM6 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
LHX6Q9UPM6 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LHX6Q9UPM6 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC20.6■□□□□ 0.89
LHX6Q9UPM6 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LHX6Q9UPM6 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.6■□□□□ 0.89
LHX6Q9UPM6 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
LHX6Q9UPM6 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
LHX6Q9UPM6 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LHX6Q9UPM6 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LHX6Q9UPM6 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LHX6Q9UPM6 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
LHX6Q9UPM6 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LHX6Q9UPM6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
LHX6Q9UPM6 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.59■□□□□ 0.89
LHX6Q9UPM6 MIR4758-201ENST00000577688 71 ntBASIC20.59■□□□□ 0.89
LHX6Q9UPM6 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.59■□□□□ 0.89
LHX6Q9UPM6 AC092118.2-201ENST00000613495 667 ntBASIC20.59■□□□□ 0.89
LHX6Q9UPM6 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
LHX6Q9UPM6 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
LHX6Q9UPM6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC20.59■□□□□ 0.89
LHX6Q9UPM6 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LHX6Q9UPM6 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
LHX6Q9UPM6 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.58■□□□□ 0.89
LHX6Q9UPM6 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
LHX6Q9UPM6 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LHX6Q9UPM6 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LHX6Q9UPM6 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LHX6Q9UPM6 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LHX6Q9UPM6 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
LHX6Q9UPM6 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LHX6Q9UPM6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.89
LHX6Q9UPM6 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LHX6Q9UPM6 UNC93B4-201ENST00000505679 747 ntBASIC20.58■□□□□ 0.89
LHX6Q9UPM6 RARRES2P4-201ENST00000514074 484 ntBASIC20.58■□□□□ 0.89
LHX6Q9UPM6 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
LHX6Q9UPM6 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
LHX6Q9UPM6 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
LHX6Q9UPM6 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.58■□□□□ 0.88
LHX6Q9UPM6 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
LHX6Q9UPM6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
LHX6Q9UPM6 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LHX6Q9UPM6 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.58■□□□□ 0.88
LHX6Q9UPM6 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LHX6Q9UPM6 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LHX6Q9UPM6 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LHX6Q9UPM6 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.57■□□□□ 0.88
LHX6Q9UPM6 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
LHX6Q9UPM6 HLA-L-211ENST00000482052 1765 ntBASIC20.57■□□□□ 0.88
LHX6Q9UPM6 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
LHX6Q9UPM6 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.57■□□□□ 0.88
LHX6Q9UPM6 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
LHX6Q9UPM6 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC20.57■□□□□ 0.88
LHX6Q9UPM6 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.57■□□□□ 0.88
LHX6Q9UPM6 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LHX6Q9UPM6 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LHX6Q9UPM6 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
LHX6Q9UPM6 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.56■□□□□ 0.88
LHX6Q9UPM6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
LHX6Q9UPM6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.56■□□□□ 0.88
LHX6Q9UPM6 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.56■□□□□ 0.88
LHX6Q9UPM6 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LHX6Q9UPM6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms