Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.09■□□□□ 0.81
NPIPA1Q9UND3 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
NPIPA1Q9UND3 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NPIPA1Q9UND3 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NPIPA1Q9UND3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
NPIPA1Q9UND3 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NPIPA1Q9UND3 AC027612.3-201ENST00000413684 1047 ntBASIC20.09■□□□□ 0.81
NPIPA1Q9UND3 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.09■□□□□ 0.81
NPIPA1Q9UND3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
NPIPA1Q9UND3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.09■□□□□ 0.81
NPIPA1Q9UND3 AL354811.1-201ENST00000610286 706 ntBASIC20.09■□□□□ 0.81
NPIPA1Q9UND3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.09■□□□□ 0.81
NPIPA1Q9UND3 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
NPIPA1Q9UND3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.09■□□□□ 0.81
NPIPA1Q9UND3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
NPIPA1Q9UND3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
NPIPA1Q9UND3 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NPIPA1Q9UND3 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
NPIPA1Q9UND3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.08■□□□□ 0.81
NPIPA1Q9UND3 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
NPIPA1Q9UND3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
NPIPA1Q9UND3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.08■□□□□ 0.8
NPIPA1Q9UND3 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
NPIPA1Q9UND3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
NPIPA1Q9UND3 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPIPA1Q9UND3 C9orf163-202ENST00000624034 2573 ntBASIC20.07■□□□□ 0.8
NPIPA1Q9UND3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPIPA1Q9UND3 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
NPIPA1Q9UND3 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.07■□□□□ 0.8
NPIPA1Q9UND3 KRT18P5-201ENST00000436075 1291 ntBASIC20.07■□□□□ 0.8
NPIPA1Q9UND3 AC123595.1-201ENST00000440769 1046 ntBASIC20.07■□□□□ 0.8
NPIPA1Q9UND3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.07■□□□□ 0.8
NPIPA1Q9UND3 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.07■□□□□ 0.8
NPIPA1Q9UND3 DUX4L2-201ENST00000561772 1275 ntBASIC20.07■□□□□ 0.8
NPIPA1Q9UND3 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.07■□□□□ 0.8
NPIPA1Q9UND3 DUX4L6-201ENST00000626483 1275 ntBASIC20.07■□□□□ 0.8
NPIPA1Q9UND3 DUX4L1-201ENST00000627662 1275 ntBASIC20.07■□□□□ 0.8
NPIPA1Q9UND3 DUX4L8-201ENST00000629013 1275 ntBASIC20.07■□□□□ 0.8
NPIPA1Q9UND3 DUX4L3-201ENST00000630187 1275 ntBASIC20.07■□□□□ 0.8
NPIPA1Q9UND3 DUX4L7-201ENST00000630678 1275 ntBASIC20.07■□□□□ 0.8
NPIPA1Q9UND3 DUX4L5-201ENST00000630834 1275 ntBASIC20.07■□□□□ 0.8
NPIPA1Q9UND3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.07■□□□□ 0.8
NPIPA1Q9UND3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPIPA1Q9UND3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
NPIPA1Q9UND3 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.07■□□□□ 0.8
NPIPA1Q9UND3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
NPIPA1Q9UND3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.06■□□□□ 0.8
NPIPA1Q9UND3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPIPA1Q9UND3 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NPIPA1Q9UND3 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
NPIPA1Q9UND3 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
NPIPA1Q9UND3 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC20.06■□□□□ 0.8
NPIPA1Q9UND3 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
NPIPA1Q9UND3 AC022517.1-201ENST00000592429 346 ntBASIC20.06■□□□□ 0.8
NPIPA1Q9UND3 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.06■□□□□ 0.8
NPIPA1Q9UND3 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
NPIPA1Q9UND3 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
NPIPA1Q9UND3 AC012676.1-201ENST00000574705 1949 ntBASIC20.06■□□□□ 0.8
NPIPA1Q9UND3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.06■□□□□ 0.8
NPIPA1Q9UND3 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
NPIPA1Q9UND3 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPIPA1Q9UND3 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC20.05■□□□□ 0.8
NPIPA1Q9UND3 AC133561.1-201ENST00000568600 2415 ntBASIC20.05■□□□□ 0.8
NPIPA1Q9UND3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPIPA1Q9UND3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPIPA1Q9UND3 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
NPIPA1Q9UND3 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.05■□□□□ 0.8
NPIPA1Q9UND3 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
NPIPA1Q9UND3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
NPIPA1Q9UND3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.05■□□□□ 0.8
NPIPA1Q9UND3 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
NPIPA1Q9UND3 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NPIPA1Q9UND3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.05■□□□□ 0.8
NPIPA1Q9UND3 IKBKGP1-201ENST00000612193 1073 ntBASIC20.05■□□□□ 0.8
NPIPA1Q9UND3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.05■□□□□ 0.8
NPIPA1Q9UND3 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPIPA1Q9UND3 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPIPA1Q9UND3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPIPA1Q9UND3 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPIPA1Q9UND3 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC20.05■□□□□ 0.8
NPIPA1Q9UND3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.05■□□□□ 0.8
NPIPA1Q9UND3 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPIPA1Q9UND3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NPIPA1Q9UND3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.04■□□□□ 0.8
NPIPA1Q9UND3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
NPIPA1Q9UND3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
NPIPA1Q9UND3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.04■□□□□ 0.8
NPIPA1Q9UND3 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.04■□□□□ 0.8
NPIPA1Q9UND3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NPIPA1Q9UND3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.04■□□□□ 0.8
NPIPA1Q9UND3 AP005435.1-201ENST00000529293 1178 ntBASIC20.04■□□□□ 0.8
NPIPA1Q9UND3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NPIPA1Q9UND3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NPIPA1Q9UND3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NPIPA1Q9UND3 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NPIPA1Q9UND3 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
NPIPA1Q9UND3 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NPIPA1Q9UND3 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NPIPA1Q9UND3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.03■□□□□ 0.8
NPIPA1Q9UND3 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms