Protein–RNA interactions for Protein: Q9UGM1

CHRNA9, Neuronal acetylcholine receptor subunit alpha-9, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA9Q9UGM1 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC19.91■□□□□ 0.78
CHRNA9Q9UGM1 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA9Q9UGM1 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.91■□□□□ 0.78
CHRNA9Q9UGM1 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA9Q9UGM1 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.91■□□□□ 0.78
CHRNA9Q9UGM1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA9Q9UGM1 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CHRNA9Q9UGM1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC19.91■□□□□ 0.78
CHRNA9Q9UGM1 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA9Q9UGM1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CHRNA9Q9UGM1 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC19.91■□□□□ 0.78
CHRNA9Q9UGM1 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC19.91■□□□□ 0.78
CHRNA9Q9UGM1 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA9Q9UGM1 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHRNA9Q9UGM1 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CHRNA9Q9UGM1 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA9Q9UGM1 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA9Q9UGM1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.9■□□□□ 0.78
CHRNA9Q9UGM1 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA9Q9UGM1 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA9Q9UGM1 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA9Q9UGM1 AC136469.2-201ENST00000623944 1028 ntBASIC19.9■□□□□ 0.78
CHRNA9Q9UGM1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC19.9■□□□□ 0.78
CHRNA9Q9UGM1 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.9■□□□□ 0.78
CHRNA9Q9UGM1 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.9■□□□□ 0.78
CHRNA9Q9UGM1 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CHRNA9Q9UGM1 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA9Q9UGM1 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CHRNA9Q9UGM1 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.9■□□□□ 0.78
CHRNA9Q9UGM1 LINC01960-201ENST00000563759 1884 ntBASIC19.9■□□□□ 0.78
CHRNA9Q9UGM1 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA9Q9UGM1 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA9Q9UGM1 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC19.9■□□□□ 0.78
CHRNA9Q9UGM1 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHRNA9Q9UGM1 UNC93B3-201ENST00000308076 687 ntBASIC19.89■□□□□ 0.77
CHRNA9Q9UGM1 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CHRNA9Q9UGM1 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.89■□□□□ 0.77
CHRNA9Q9UGM1 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.89■□□□□ 0.77
CHRNA9Q9UGM1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHRNA9Q9UGM1 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.89■□□□□ 0.77
CHRNA9Q9UGM1 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHRNA9Q9UGM1 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.89■□□□□ 0.77
CHRNA9Q9UGM1 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
CHRNA9Q9UGM1 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHRNA9Q9UGM1 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CHRNA9Q9UGM1 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CHRNA9Q9UGM1 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
CHRNA9Q9UGM1 AC137767.1-201ENST00000602918 1920 ntBASIC19.88■□□□□ 0.77
CHRNA9Q9UGM1 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA9Q9UGM1 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
CHRNA9Q9UGM1 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA9Q9UGM1 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA9Q9UGM1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.88■□□□□ 0.77
CHRNA9Q9UGM1 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA9Q9UGM1 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA9Q9UGM1 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC19.88■□□□□ 0.77
CHRNA9Q9UGM1 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CHRNA9Q9UGM1 AC080038.3-201ENST00000623346 1952 ntBASIC19.88■□□□□ 0.77
CHRNA9Q9UGM1 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CHRNA9Q9UGM1 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA9Q9UGM1 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA9Q9UGM1 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA9Q9UGM1 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CHRNA9Q9UGM1 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA9Q9UGM1 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.87■□□□□ 0.77
CHRNA9Q9UGM1 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA9Q9UGM1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CHRNA9Q9UGM1 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC19.87■□□□□ 0.77
CHRNA9Q9UGM1 OR2I1P-207ENST00000453522 948 ntBASIC19.87■□□□□ 0.77
CHRNA9Q9UGM1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.87■□□□□ 0.77
CHRNA9Q9UGM1 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CHRNA9Q9UGM1 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA9Q9UGM1 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA9Q9UGM1 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CHRNA9Q9UGM1 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA9Q9UGM1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
CHRNA9Q9UGM1 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA9Q9UGM1 AC092053.2-201ENST00000640557 1818 ntBASIC19.86■□□□□ 0.77
CHRNA9Q9UGM1 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA9Q9UGM1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA9Q9UGM1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA9Q9UGM1 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.86■□□□□ 0.77
CHRNA9Q9UGM1 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA9Q9UGM1 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA9Q9UGM1 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
CHRNA9Q9UGM1 PTMA-205ENST00000410064 814 ntTSL 2 BASIC19.86■□□□□ 0.77
CHRNA9Q9UGM1 AC096631.2-201ENST00000436136 790 ntBASIC19.86■□□□□ 0.77
CHRNA9Q9UGM1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC19.86■□□□□ 0.77
CHRNA9Q9UGM1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA9Q9UGM1 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.86■□□□□ 0.77
CHRNA9Q9UGM1 AL136162.1-201ENST00000607711 1078 ntBASIC19.86■□□□□ 0.77
CHRNA9Q9UGM1 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA9Q9UGM1 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA9Q9UGM1 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA9Q9UGM1 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.86■□□□□ 0.77
CHRNA9Q9UGM1 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
CHRNA9Q9UGM1 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
CHRNA9Q9UGM1 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.85■□□□□ 0.77
CHRNA9Q9UGM1 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
CHRNA9Q9UGM1 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms