Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRIT1Q9P2V4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC21.18■□□□□ 0.98
LRIT1Q9P2V4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC21.18■□□□□ 0.98
LRIT1Q9P2V4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LRIT1Q9P2V4 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LRIT1Q9P2V4 ANOS2P-203ENST00000472227 1816 ntBASIC21.18■□□□□ 0.98
LRIT1Q9P2V4 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC21.18■□□□□ 0.98
LRIT1Q9P2V4 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRIT1Q9P2V4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRIT1Q9P2V4 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRIT1Q9P2V4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRIT1Q9P2V4 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
LRIT1Q9P2V4 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRIT1Q9P2V4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
LRIT1Q9P2V4 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.17■□□□□ 0.98
LRIT1Q9P2V4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRIT1Q9P2V4 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.17■□□□□ 0.98
LRIT1Q9P2V4 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC21.17■□□□□ 0.98
LRIT1Q9P2V4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC21.17■□□□□ 0.98
LRIT1Q9P2V4 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LRIT1Q9P2V4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.17■□□□□ 0.98
LRIT1Q9P2V4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRIT1Q9P2V4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LRIT1Q9P2V4 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
LRIT1Q9P2V4 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.17■□□□□ 0.98
LRIT1Q9P2V4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.16■□□□□ 0.98
LRIT1Q9P2V4 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRIT1Q9P2V4 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRIT1Q9P2V4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRIT1Q9P2V4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC21.16■□□□□ 0.98
LRIT1Q9P2V4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
LRIT1Q9P2V4 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.16■□□□□ 0.98
LRIT1Q9P2V4 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.16■□□□□ 0.98
LRIT1Q9P2V4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC21.16■□□□□ 0.98
LRIT1Q9P2V4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC21.16■□□□□ 0.98
LRIT1Q9P2V4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LRIT1Q9P2V4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.16■□□□□ 0.98
LRIT1Q9P2V4 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC21.16■□□□□ 0.98
LRIT1Q9P2V4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.16■□□□□ 0.98
LRIT1Q9P2V4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.16■□□□□ 0.98
LRIT1Q9P2V4 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC21.16■□□□□ 0.98
LRIT1Q9P2V4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.16■□□□□ 0.98
LRIT1Q9P2V4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.16■□□□□ 0.98
LRIT1Q9P2V4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
LRIT1Q9P2V4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LRIT1Q9P2V4 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.16■□□□□ 0.98
LRIT1Q9P2V4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRIT1Q9P2V4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRIT1Q9P2V4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRIT1Q9P2V4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.15■□□□□ 0.98
LRIT1Q9P2V4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LRIT1Q9P2V4 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LRIT1Q9P2V4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
LRIT1Q9P2V4 DUSP8P3-201ENST00000399571 1760 ntBASIC21.15■□□□□ 0.98
LRIT1Q9P2V4 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LRIT1Q9P2V4 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRIT1Q9P2V4 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.14■□□□□ 0.97
LRIT1Q9P2V4 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC21.14■□□□□ 0.97
LRIT1Q9P2V4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC21.14■□□□□ 0.97
LRIT1Q9P2V4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC21.14■□□□□ 0.97
LRIT1Q9P2V4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRIT1Q9P2V4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
LRIT1Q9P2V4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.13■□□□□ 0.97
LRIT1Q9P2V4 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
LRIT1Q9P2V4 AC092068.2-201ENST00000590491 1708 ntBASIC21.13■□□□□ 0.97
LRIT1Q9P2V4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.13■□□□□ 0.97
LRIT1Q9P2V4 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRIT1Q9P2V4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LRIT1Q9P2V4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.13■□□□□ 0.97
LRIT1Q9P2V4 KRT18P61-201ENST00000585825 1298 ntBASIC21.13■□□□□ 0.97
LRIT1Q9P2V4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.13■□□□□ 0.97
LRIT1Q9P2V4 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.13■□□□□ 0.97
LRIT1Q9P2V4 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC21.13■□□□□ 0.97
LRIT1Q9P2V4 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
LRIT1Q9P2V4 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRIT1Q9P2V4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.12■□□□□ 0.97
LRIT1Q9P2V4 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LRIT1Q9P2V4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRIT1Q9P2V4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC21.12■□□□□ 0.97
LRIT1Q9P2V4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.12■□□□□ 0.97
LRIT1Q9P2V4 AP004607.4-201ENST00000530158 1459 ntBASIC21.12■□□□□ 0.97
LRIT1Q9P2V4 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRIT1Q9P2V4 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
LRIT1Q9P2V4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.12■□□□□ 0.97
LRIT1Q9P2V4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LRIT1Q9P2V4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
LRIT1Q9P2V4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRIT1Q9P2V4 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRIT1Q9P2V4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LRIT1Q9P2V4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC21.11■□□□□ 0.97
LRIT1Q9P2V4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRIT1Q9P2V4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
LRIT1Q9P2V4 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LRIT1Q9P2V4 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LRIT1Q9P2V4 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.11■□□□□ 0.97
LRIT1Q9P2V4 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.1■□□□□ 0.97
LRIT1Q9P2V4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC21.1■□□□□ 0.97
LRIT1Q9P2V4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.1■□□□□ 0.97
LRIT1Q9P2V4 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LRIT1Q9P2V4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms