Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
CCM2LQ9NUG4 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCM2LQ9NUG4 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.71■□□□□ 0.91
CCM2LQ9NUG4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCM2LQ9NUG4 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CCM2LQ9NUG4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CCM2LQ9NUG4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.71■□□□□ 0.91
CCM2LQ9NUG4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
CCM2LQ9NUG4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.91
CCM2LQ9NUG4 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
CCM2LQ9NUG4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.7■□□□□ 0.91
CCM2LQ9NUG4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCM2LQ9NUG4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CCM2LQ9NUG4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
CCM2LQ9NUG4 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCM2LQ9NUG4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCM2LQ9NUG4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CCM2LQ9NUG4 TSPY9P-201ENST00000440215 945 ntBASIC20.7■□□□□ 0.9
CCM2LQ9NUG4 TSPY11P-201ENST00000442607 1045 ntBASIC20.7■□□□□ 0.9
CCM2LQ9NUG4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.7■□□□□ 0.9
CCM2LQ9NUG4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
CCM2LQ9NUG4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCM2LQ9NUG4 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.9
CCM2LQ9NUG4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CCM2LQ9NUG4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCM2LQ9NUG4 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC20.69■□□□□ 0.9
CCM2LQ9NUG4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CCM2LQ9NUG4 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCM2LQ9NUG4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CCM2LQ9NUG4 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCM2LQ9NUG4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
CCM2LQ9NUG4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CCM2LQ9NUG4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CCM2LQ9NUG4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.68■□□□□ 0.9
CCM2LQ9NUG4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCM2LQ9NUG4 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC20.68■□□□□ 0.9
CCM2LQ9NUG4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCM2LQ9NUG4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCM2LQ9NUG4 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC20.68■□□□□ 0.9
CCM2LQ9NUG4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.68■□□□□ 0.9
CCM2LQ9NUG4 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.68■□□□□ 0.9
CCM2LQ9NUG4 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCM2LQ9NUG4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCM2LQ9NUG4 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
CCM2LQ9NUG4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
CCM2LQ9NUG4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCM2LQ9NUG4 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.67■□□□□ 0.9
CCM2LQ9NUG4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCM2LQ9NUG4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
CCM2LQ9NUG4 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.67■□□□□ 0.9
CCM2LQ9NUG4 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCM2LQ9NUG4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.67■□□□□ 0.9
CCM2LQ9NUG4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCM2LQ9NUG4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCM2LQ9NUG4 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CCM2LQ9NUG4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.67■□□□□ 0.9
CCM2LQ9NUG4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCM2LQ9NUG4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCM2LQ9NUG4 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCM2LQ9NUG4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.66■□□□□ 0.9
CCM2LQ9NUG4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.66■□□□□ 0.9
CCM2LQ9NUG4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.66■□□□□ 0.9
CCM2LQ9NUG4 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
CCM2LQ9NUG4 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCM2LQ9NUG4 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCM2LQ9NUG4 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.66■□□□□ 0.9
CCM2LQ9NUG4 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCM2LQ9NUG4 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCM2LQ9NUG4 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.66■□□□□ 0.9
CCM2LQ9NUG4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCM2LQ9NUG4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.65■□□□□ 0.9
CCM2LQ9NUG4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.65■□□□□ 0.9
CCM2LQ9NUG4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCM2LQ9NUG4 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.65■□□□□ 0.9
CCM2LQ9NUG4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.65■□□□□ 0.9
CCM2LQ9NUG4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.65■□□□□ 0.9
CCM2LQ9NUG4 USF2-207ENST00000595068 1612 ntTSL 5 BASIC20.65■□□□□ 0.9
CCM2LQ9NUG4 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCM2LQ9NUG4 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCM2LQ9NUG4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.65■□□□□ 0.9
CCM2LQ9NUG4 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCM2LQ9NUG4 AC022616.5-201ENST00000518796 181 ntBASIC20.65■□□□□ 0.9
CCM2LQ9NUG4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.65■□□□□ 0.9
CCM2LQ9NUG4 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.65■□□□□ 0.9
CCM2LQ9NUG4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCM2LQ9NUG4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCM2LQ9NUG4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
CCM2LQ9NUG4 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
CCM2LQ9NUG4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCM2LQ9NUG4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
CCM2LQ9NUG4 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
CCM2LQ9NUG4 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCM2LQ9NUG4 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CCM2LQ9NUG4 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCM2LQ9NUG4 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCM2LQ9NUG4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CCM2LQ9NUG4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.64■□□□□ 0.89
CCM2LQ9NUG4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCM2LQ9NUG4 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCM2LQ9NUG4 AC244015.2-201ENST00000616358 1861 ntBASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms