Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
ATP13A1Q9HD20 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC22.38■■□□□ 1.17
ATP13A1Q9HD20 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ATP13A1Q9HD20 RHOF-204ENST00000537265 699 ntTSL 2 BASIC22.38■■□□□ 1.17
ATP13A1Q9HD20 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC22.38■■□□□ 1.17
ATP13A1Q9HD20 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ATP13A1Q9HD20 COMT-203ENST00000403184 2217 ntTSL 2 BASIC22.38■■□□□ 1.17
ATP13A1Q9HD20 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC22.38■■□□□ 1.17
ATP13A1Q9HD20 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.37■■□□□ 1.17
ATP13A1Q9HD20 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ATP13A1Q9HD20 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
ATP13A1Q9HD20 IRS3P-201ENST00000223076 1006 ntBASIC22.37■■□□□ 1.17
ATP13A1Q9HD20 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
ATP13A1Q9HD20 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ATP13A1Q9HD20 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC22.37■■□□□ 1.17
ATP13A1Q9HD20 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
ATP13A1Q9HD20 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.37■■□□□ 1.17
ATP13A1Q9HD20 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.37■■□□□ 1.17
ATP13A1Q9HD20 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
ATP13A1Q9HD20 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC22.37■■□□□ 1.17
ATP13A1Q9HD20 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC22.36■■□□□ 1.17
ATP13A1Q9HD20 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
ATP13A1Q9HD20 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.36■■□□□ 1.17
ATP13A1Q9HD20 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ATP13A1Q9HD20 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
ATP13A1Q9HD20 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
ATP13A1Q9HD20 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC22.36■■□□□ 1.17
ATP13A1Q9HD20 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ATP13A1Q9HD20 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.36■■□□□ 1.17
ATP13A1Q9HD20 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC22.36■■□□□ 1.17
ATP13A1Q9HD20 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC22.36■■□□□ 1.17
ATP13A1Q9HD20 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ATP13A1Q9HD20 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.36■■□□□ 1.17
ATP13A1Q9HD20 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ATP13A1Q9HD20 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC22.35■■□□□ 1.17
ATP13A1Q9HD20 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.35■■□□□ 1.17
ATP13A1Q9HD20 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC22.35■■□□□ 1.17
ATP13A1Q9HD20 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATP13A1Q9HD20 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATP13A1Q9HD20 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATP13A1Q9HD20 AC010141.3-201ENST00000456659 717 ntBASIC22.35■■□□□ 1.17
ATP13A1Q9HD20 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATP13A1Q9HD20 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATP13A1Q9HD20 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.35■■□□□ 1.17
ATP13A1Q9HD20 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ATP13A1Q9HD20 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ATP13A1Q9HD20 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
ATP13A1Q9HD20 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
ATP13A1Q9HD20 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
ATP13A1Q9HD20 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC22.34■■□□□ 1.17
ATP13A1Q9HD20 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ATP13A1Q9HD20 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC22.34■■□□□ 1.17
ATP13A1Q9HD20 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC22.34■■□□□ 1.17
ATP13A1Q9HD20 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ATP13A1Q9HD20 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ATP13A1Q9HD20 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.34■■□□□ 1.17
ATP13A1Q9HD20 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.34■■□□□ 1.17
ATP13A1Q9HD20 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC22.33■■□□□ 1.17
ATP13A1Q9HD20 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
ATP13A1Q9HD20 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ATP13A1Q9HD20 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC22.33■■□□□ 1.17
ATP13A1Q9HD20 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ATP13A1Q9HD20 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
ATP13A1Q9HD20 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
ATP13A1Q9HD20 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
ATP13A1Q9HD20 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
ATP13A1Q9HD20 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
ATP13A1Q9HD20 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ATP13A1Q9HD20 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ATP13A1Q9HD20 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
ATP13A1Q9HD20 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
ATP13A1Q9HD20 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
ATP13A1Q9HD20 MIR572-201ENST00000384983 95 ntBASIC22.32■■□□□ 1.16
ATP13A1Q9HD20 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
ATP13A1Q9HD20 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC22.32■■□□□ 1.16
ATP13A1Q9HD20 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
ATP13A1Q9HD20 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC22.32■■□□□ 1.16
ATP13A1Q9HD20 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ATP13A1Q9HD20 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
ATP13A1Q9HD20 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ATP13A1Q9HD20 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ATP13A1Q9HD20 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
ATP13A1Q9HD20 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.31■■□□□ 1.16
ATP13A1Q9HD20 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
ATP13A1Q9HD20 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ATP13A1Q9HD20 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.31■■□□□ 1.16
ATP13A1Q9HD20 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC22.31■■□□□ 1.16
ATP13A1Q9HD20 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
ATP13A1Q9HD20 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
ATP13A1Q9HD20 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.31■■□□□ 1.16
ATP13A1Q9HD20 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
ATP13A1Q9HD20 ESRRAP2-201ENST00000418437 1549 ntBASIC22.31■■□□□ 1.16
ATP13A1Q9HD20 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
ATP13A1Q9HD20 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ATP13A1Q9HD20 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ATP13A1Q9HD20 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
ATP13A1Q9HD20 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
ATP13A1Q9HD20 LHPP-203ENST00000392757 840 ntTSL 3 BASIC22.3■■□□□ 1.16
ATP13A1Q9HD20 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
ATP13A1Q9HD20 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms