Protein–RNA interactions for Protein: Q9HCL0

PCDH18, Protocadherin-18, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH18Q9HCL0 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
PCDH18Q9HCL0 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
PCDH18Q9HCL0 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDH18Q9HCL0 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDH18Q9HCL0 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PCDH18Q9HCL0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC22.64■■□□□ 1.21
PCDH18Q9HCL0 AC010525.1-201ENST00000585559 441 ntBASIC22.64■■□□□ 1.21
PCDH18Q9HCL0 SF1-220ENST00000626028 704 ntTSL 2 BASIC22.64■■□□□ 1.21
PCDH18Q9HCL0 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
PCDH18Q9HCL0 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDH18Q9HCL0 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDH18Q9HCL0 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
PCDH18Q9HCL0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
PCDH18Q9HCL0 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH18Q9HCL0 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.63■■□□□ 1.21
PCDH18Q9HCL0 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH18Q9HCL0 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH18Q9HCL0 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC22.63■■□□□ 1.21
PCDH18Q9HCL0 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH18Q9HCL0 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.63■■□□□ 1.21
PCDH18Q9HCL0 AC011298.3-201ENST00000615796 283 ntBASIC22.63■■□□□ 1.21
PCDH18Q9HCL0 AC136469.2-201ENST00000623944 1028 ntBASIC22.63■■□□□ 1.21
PCDH18Q9HCL0 AC092053.2-201ENST00000640557 1818 ntBASIC22.63■■□□□ 1.21
PCDH18Q9HCL0 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
PCDH18Q9HCL0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH18Q9HCL0 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH18Q9HCL0 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC22.63■■□□□ 1.21
PCDH18Q9HCL0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC22.62■■□□□ 1.21
PCDH18Q9HCL0 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH18Q9HCL0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.62■■□□□ 1.21
PCDH18Q9HCL0 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC22.62■■□□□ 1.21
PCDH18Q9HCL0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH18Q9HCL0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH18Q9HCL0 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH18Q9HCL0 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
PCDH18Q9HCL0 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.62■■□□□ 1.21
PCDH18Q9HCL0 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC22.62■■□□□ 1.21
PCDH18Q9HCL0 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.62■■□□□ 1.21
PCDH18Q9HCL0 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH18Q9HCL0 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
PCDH18Q9HCL0 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH18Q9HCL0 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH18Q9HCL0 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.62■■□□□ 1.21
PCDH18Q9HCL0 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
PCDH18Q9HCL0 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
PCDH18Q9HCL0 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH18Q9HCL0 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC22.61■■□□□ 1.21
PCDH18Q9HCL0 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC22.61■■□□□ 1.21
PCDH18Q9HCL0 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC22.61■■□□□ 1.21
PCDH18Q9HCL0 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH18Q9HCL0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH18Q9HCL0 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC22.61■■□□□ 1.21
PCDH18Q9HCL0 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH18Q9HCL0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.61■■□□□ 1.21
PCDH18Q9HCL0 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC22.61■■□□□ 1.21
PCDH18Q9HCL0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH18Q9HCL0 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH18Q9HCL0 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH18Q9HCL0 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH18Q9HCL0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC22.6■■□□□ 1.21
PCDH18Q9HCL0 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
PCDH18Q9HCL0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDH18Q9HCL0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC22.6■■□□□ 1.21
PCDH18Q9HCL0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDH18Q9HCL0 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
PCDH18Q9HCL0 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC22.6■■□□□ 1.21
PCDH18Q9HCL0 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDH18Q9HCL0 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC22.6■■□□□ 1.21
PCDH18Q9HCL0 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
PCDH18Q9HCL0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDH18Q9HCL0 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDH18Q9HCL0 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDH18Q9HCL0 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PCDH18Q9HCL0 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
PCDH18Q9HCL0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PCDH18Q9HCL0 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDH18Q9HCL0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC22.58■■□□□ 1.21
PCDH18Q9HCL0 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.58■■□□□ 1.21
PCDH18Q9HCL0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PCDH18Q9HCL0 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDH18Q9HCL0 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
PCDH18Q9HCL0 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC22.58■■□□□ 1.21
PCDH18Q9HCL0 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDH18Q9HCL0 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
PCDH18Q9HCL0 UNC93B3-201ENST00000308076 687 ntBASIC22.58■■□□□ 1.21
PCDH18Q9HCL0 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDH18Q9HCL0 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.58■■□□□ 1.21
PCDH18Q9HCL0 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDH18Q9HCL0 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PCDH18Q9HCL0 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC22.58■■□□□ 1.21
PCDH18Q9HCL0 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDH18Q9HCL0 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PCDH18Q9HCL0 AC008406.3-201ENST00000620001 1374 ntBASIC22.58■■□□□ 1.21
PCDH18Q9HCL0 LINC00565-201ENST00000562710 2331 ntBASIC22.58■■□□□ 1.2
PCDH18Q9HCL0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.2
PCDH18Q9HCL0 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC22.57■■□□□ 1.2
PCDH18Q9HCL0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22.57■■□□□ 1.2
PCDH18Q9HCL0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PCDH18Q9HCL0 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
PCDH18Q9HCL0 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms