Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SND1-IT1Q9HBX3 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SND1-IT1Q9HBX3 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
SND1-IT1Q9HBX3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
SND1-IT1Q9HBX3 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
SND1-IT1Q9HBX3 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
SND1-IT1Q9HBX3 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
SND1-IT1Q9HBX3 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SND1-IT1Q9HBX3 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
SND1-IT1Q9HBX3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC14.56□□□□□ -0.08
SND1-IT1Q9HBX3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SND1-IT1Q9HBX3 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
SND1-IT1Q9HBX3 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SND1-IT1Q9HBX3 LBH-205ENST00000407930 756 ntTSL 2 BASIC14.56□□□□□ -0.08
SND1-IT1Q9HBX3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SND1-IT1Q9HBX3 HYI-210ENST00000486909 905 ntTSL 5 BASIC14.56□□□□□ -0.08
SND1-IT1Q9HBX3 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC14.56□□□□□ -0.08
SND1-IT1Q9HBX3 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC14.56□□□□□ -0.08
SND1-IT1Q9HBX3 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC14.56□□□□□ -0.08
SND1-IT1Q9HBX3 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SND1-IT1Q9HBX3 AL353803.4-201ENST00000565882 1934 ntBASIC14.56□□□□□ -0.08
SND1-IT1Q9HBX3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
SND1-IT1Q9HBX3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
SND1-IT1Q9HBX3 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
SND1-IT1Q9HBX3 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
SND1-IT1Q9HBX3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
SND1-IT1Q9HBX3 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SND1-IT1Q9HBX3 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SND1-IT1Q9HBX3 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC14.55□□□□□ -0.08
SND1-IT1Q9HBX3 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
SND1-IT1Q9HBX3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SND1-IT1Q9HBX3 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SND1-IT1Q9HBX3 FAM99A-202ENST00000538190 1989 ntBASIC14.55□□□□□ -0.08
SND1-IT1Q9HBX3 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
SND1-IT1Q9HBX3 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SND1-IT1Q9HBX3 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SND1-IT1Q9HBX3 ABHD17AP3-201ENST00000503096 1137 ntBASIC14.55□□□□□ -0.08
SND1-IT1Q9HBX3 AC022616.5-201ENST00000518796 181 ntBASIC14.55□□□□□ -0.08
SND1-IT1Q9HBX3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SND1-IT1Q9HBX3 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC14.55□□□□□ -0.08
SND1-IT1Q9HBX3 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
SND1-IT1Q9HBX3 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SND1-IT1Q9HBX3 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC14.55□□□□□ -0.08
SND1-IT1Q9HBX3 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC14.55□□□□□ -0.08
SND1-IT1Q9HBX3 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
SND1-IT1Q9HBX3 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SND1-IT1Q9HBX3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SND1-IT1Q9HBX3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
SND1-IT1Q9HBX3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SND1-IT1Q9HBX3 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
SND1-IT1Q9HBX3 AC073130.3-201ENST00000624389 2278 ntBASIC14.54□□□□□ -0.08
SND1-IT1Q9HBX3 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SND1-IT1Q9HBX3 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SND1-IT1Q9HBX3 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC14.54□□□□□ -0.08
SND1-IT1Q9HBX3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
SND1-IT1Q9HBX3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC14.54□□□□□ -0.08
SND1-IT1Q9HBX3 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
SND1-IT1Q9HBX3 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SND1-IT1Q9HBX3 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC14.54□□□□□ -0.08
SND1-IT1Q9HBX3 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SND1-IT1Q9HBX3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC14.54□□□□□ -0.08
SND1-IT1Q9HBX3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SND1-IT1Q9HBX3 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
SND1-IT1Q9HBX3 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
SND1-IT1Q9HBX3 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
SND1-IT1Q9HBX3 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SND1-IT1Q9HBX3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
SND1-IT1Q9HBX3 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SND1-IT1Q9HBX3 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC14.53□□□□□ -0.08
SND1-IT1Q9HBX3 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC14.53□□□□□ -0.08
SND1-IT1Q9HBX3 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
SND1-IT1Q9HBX3 MBP-237ENST00000579129 1052 ntTSL 5 BASIC14.53□□□□□ -0.08
SND1-IT1Q9HBX3 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC14.53□□□□□ -0.08
SND1-IT1Q9HBX3 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
SND1-IT1Q9HBX3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
SND1-IT1Q9HBX3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
SND1-IT1Q9HBX3 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
SND1-IT1Q9HBX3 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
SND1-IT1Q9HBX3 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
SND1-IT1Q9HBX3 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC14.52□□□□□ -0.08
SND1-IT1Q9HBX3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC14.52□□□□□ -0.08
SND1-IT1Q9HBX3 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SND1-IT1Q9HBX3 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SND1-IT1Q9HBX3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
SND1-IT1Q9HBX3 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
SND1-IT1Q9HBX3 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SND1-IT1Q9HBX3 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SND1-IT1Q9HBX3 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SND1-IT1Q9HBX3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SND1-IT1Q9HBX3 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC14.52□□□□□ -0.09
SND1-IT1Q9HBX3 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC14.52□□□□□ -0.09
SND1-IT1Q9HBX3 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
SND1-IT1Q9HBX3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SND1-IT1Q9HBX3 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC14.52□□□□□ -0.09
SND1-IT1Q9HBX3 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
SND1-IT1Q9HBX3 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC14.52□□□□□ -0.09
SND1-IT1Q9HBX3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC14.52□□□□□ -0.09
SND1-IT1Q9HBX3 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SND1-IT1Q9HBX3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
SND1-IT1Q9HBX3 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms